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Protein

ABC transporter B family member 9

Gene

ABCB9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi390 – 3978ATPPROSITE-ProRule annotation
Nucleotide bindingi1028 – 10358ATPPROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT4G18050-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter B family member 9
Short name:
ABC transporter ABCB.9
Short name:
AtABCB9
Alternative name(s):
Multidrug resistance protein 9
P-glycoprotein 9
Gene namesi
Name:ABCB9
Synonyms:MDR9, PGP9
Ordered Locus Names:At4g18050
ORF Names:F15J5.20
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G18050.

Subcellular locationi

  • Membrane PROSITE-ProRule annotation; Multi-pass membrane protein PROSITE-ProRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei38 – 5821HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei80 – 10021HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei158 – 17821HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei179 – 19921HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei257 – 27721HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei288 – 30821HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei685 – 70521HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei725 – 74521HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei785 – 80521HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei806 – 82621HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei902 – 92221HelicalPROSITE-ProRule annotationAdd
BLAST
Transmembranei927 – 94721HelicalPROSITE-ProRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12361236ABC transporter B family member 9PRO_0000227920Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi542 – 5421N-linked (GlcNAc...)Sequence analysis
Glycosylationi631 – 6311N-linked (GlcNAc...)Sequence analysis
Glycosylationi653 – 6531N-linked (GlcNAc...)Sequence analysis
Glycosylationi1082 – 10821N-linked (GlcNAc...)Sequence analysis
Glycosylationi1181 – 11811N-linked (GlcNAc...)Sequence analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ9M0M2.
PRIDEiQ9M0M2.

Expressioni

Gene expression databases

GenevisibleiQ9M0M2. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G18050.1.

Structurei

3D structure databases

ProteinModelPortaliQ9M0M2.
SMRiQ9M0M2. Positions 16-633, 686-1232.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini33 – 320288ABC transmembrane type-1 1PROSITE-ProRule annotationAdd
BLAST
Domaini355 – 591237ABC transporter 1PROSITE-ProRule annotationAdd
BLAST
Domaini686 – 958273ABC transmembrane type-1 2PROSITE-ProRule annotationAdd
BLAST
Domaini993 – 1230238ABC transporter 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 2 ABC transmembrane type-1 domains.PROSITE-ProRule annotation
Contains 2 ABC transporter domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0055. Eukaryota.
COG1132. LUCA.
InParanoidiQ9M0M2.
KOiK05658.
OMAiFLALYCT.
OrthoDBiEOG093600JM.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00664. ABC_membrane. 2 hits.
PF00005. ABC_tran. 2 hits.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF90123. SSF90123. 2 hits.
PROSITEiPS50929. ABC_TM1F. 2 hits.
PS00211. ABC_TRANSPORTER_1. 2 hits.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9M0M2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM
60 70 80 90 100
TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV AFLQVSCWMV
110 120 130 140 150
TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG
160 170 180 190 200
EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI AGAAMSLIMS
210 220 230 240 250
KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT
260 270 280 290 300
VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN GGQVINVIFA
310 320 330 340 350
VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED
360 370 380 390 400
IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG QSGSGKSTVI
410 420 430 440 450
SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN
460 470 480 490 500
IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH GTQMSGGQKQ
510 520 530 540 550
RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH
560 570 580 590 600
RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV RLQEGSKEEA
610 620 630 640 650
TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV
660 670 680 690 700
NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS IAAMVHGTVF
710 720 730 740 750
PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF
760 770 780 790 800
GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA LALIVQNIAT
810 820 830 840 850
VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE
860 870 880 890 900
ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV RLGLLSGAGF
910 920 930 940 950
GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS
960 970 980 990 1000
AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN GDIEFRHVSF
1010 1020 1030 1040 1050
RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG
1060 1070 1080 1090 1100
KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA YGKTGGATEE
1110 1120 1130 1140 1150
EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD
1160 1170 1180 1190 1200
PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR LTTIKNADVI
1210 1220 1230
AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN
Length:1,236
Mass (Da):134,366
Last modified:February 22, 2012 - v2
Checksum:i998787871DDC4489
GO

Sequence cautioni

The sequence CAB53646 differs from that shown. Reason: Frameshift at position 1218. Curated
The sequence CAB53646 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence CAB78807 differs from that shown. Reason: Frameshift at position 1218. Curated
The sequence CAB78807 differs from that shown. Reason: Erroneous gene model prediction. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti746 – 7461Q → P in CAB53646 (PubMed:10617198).Curated
Sequence conflicti746 – 7461Q → P in CAB78807 (PubMed:10617198).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL110123 Genomic DNA. Translation: CAB53646.1. Sequence problems.
AL161547 Genomic DNA. Translation: CAB78807.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE83988.1.
PIRiH85202.
T14805.
RefSeqiNP_193539.6. NM_117915.6.
UniGeneiAt.54385.

Genome annotation databases

EnsemblPlantsiAT4G18050.1; AT4G18050.1; AT4G18050.
GeneIDi827530.
GrameneiAT4G18050.1; AT4G18050.1; AT4G18050.
KEGGiath:AT4G18050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL110123 Genomic DNA. Translation: CAB53646.1. Sequence problems.
AL161547 Genomic DNA. Translation: CAB78807.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE83988.1.
PIRiH85202.
T14805.
RefSeqiNP_193539.6. NM_117915.6.
UniGeneiAt.54385.

3D structure databases

ProteinModelPortaliQ9M0M2.
SMRiQ9M0M2. Positions 16-633, 686-1232.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G18050.1.

Proteomic databases

PaxDbiQ9M0M2.
PRIDEiQ9M0M2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G18050.1; AT4G18050.1; AT4G18050.
GeneIDi827530.
GrameneiAT4G18050.1; AT4G18050.1; AT4G18050.
KEGGiath:AT4G18050.

Organism-specific databases

TAIRiAT4G18050.

Phylogenomic databases

eggNOGiKOG0055. Eukaryota.
COG1132. LUCA.
InParanoidiQ9M0M2.
KOiK05658.
OMAiFLALYCT.
OrthoDBiEOG093600JM.

Enzyme and pathway databases

BioCyciARA:AT4G18050-MONOMER.

Miscellaneous databases

PROiQ9M0M2.

Gene expression databases

GenevisibleiQ9M0M2. AT.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00664. ABC_membrane. 2 hits.
PF00005. ABC_tran. 2 hits.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF90123. SSF90123. 2 hits.
PROSITEiPS50929. ABC_TM1F. 2 hits.
PS00211. ABC_TRANSPORTER_1. 2 hits.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiAB9B_ARATH
AccessioniPrimary (citable) accession number: Q9M0M2
Secondary accession number(s): F4JQQ3, Q9SVW6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 21, 2006
Last sequence update: February 22, 2012
Last modified: September 7, 2016
This is version 98 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.