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Protein
Submitted name:

AGAMOUS-like 99

Gene

T32M21_240

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AGAMOUS-like 99Imported
Submitted name:
MADS-box family proteinImported
Submitted name:
MADS-box protein-likeImported
Gene namesi
Name:T32M21_240Imported
Synonyms:AGAMOUS-like 99Imported, AGL99Imported
Ordered Locus Names:At5g04640Imported
ORF Names:T1E3.5Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G04640
TAIRilocus:2184427 AT5G04640

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiQ9LZ61 baseline and differential

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ9LZ61, 8 interactors
STRINGi3702.AT5G04640.1

Structurei

3D structure databases

SMRiQ9LZ61
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 48MADS-boxInterPro annotationAdd BLAST46

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili102 – 132Sequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0014 Eukaryota
COG5068 LUCA
HOGENOMiHOG000033848
OrthoDBiEOG09360PZ0

Family and domain databases

CDDicd00266 MADS_SRF_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR033897 MADS_SRF-like
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q9LZ61-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGVKRKISI ELIEKKDSRA VAFSKRSRGL YSKASDLCLL SDAQIAIIAT
60 70 80 90 100
PVSSKSNVSF YTFGHSSVDN VVAAFLTNQR PREGLGLDYW WEDERLSKSE
110 120 130 140 150
DLEELRDAMD SMSKMLKDLK DLQNQRDCEE DVKKKGVLHG THQKQTFNPE
160 170 180 190 200
SCSVNFDGFN KNTEEFDLDE IFDYVSTAEA LSMNLDMDDV SVVTTNQNPV
210 220 230 240 250
SASETVEDRE LVVHKNMDED NIHVSDMDDK DTMLMISDKN NVLPENLDEF
260 270 280 290 300
DQELDLDQLL DFETNYESLL KSCEMEDYAS MVTTKQNLCS NPEAVEDGGL
310 320
MIQKDLPEDN LCFSDYFSDL HC
Length:322
Mass (Da):36,554
Last modified:October 1, 2000 - v1
Checksum:i7DF8EAF0B104C5EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ056669 mRNA Translation: AAY78815.1
CP002688 Genomic DNA Translation: AED90768.1
AL162875 Genomic DNA Translation: CAB85570.1
PIRiT48460
RefSeqiNP_196084.1, NM_120546.2
UniGeneiAt.54720

Genome annotation databases

EnsemblPlantsiAT5G04640.1; AT5G04640.1; AT5G04640
GeneIDi830341
GrameneiAT5G04640.1; AT5G04640.1; AT5G04640
KEGGiath:AT5G04640

Similar proteinsi

Entry informationi

Entry nameiQ9LZ61_ARATH
AccessioniPrimary (citable) accession number: Q9LZ61
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 23, 2018
This is version 129 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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