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Protein
Submitted name:

AGAMOUS-like 99

Gene

T32M21_240

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AGAMOUS-like 99Imported
Submitted name:
MADS-box family proteinImported
Submitted name:
MADS-box protein-likeImported
Gene namesi
Name:T32M21_240Imported
Synonyms:AGAMOUS-like 99Imported, AGL99Imported
Ordered Locus Names:At5g04640Imported
ORF Names:T1E3.5Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRilocus:2184427. AT5G04640.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G04640.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 48MADS-boxInterPro annotationAdd BLAST46

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili102 – 132Sequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000033848.
OMAiRDAMDSM.
OrthoDBiEOG09360PZ0.

Family and domain databases

CDDicd00266. MADS_SRF_like. 1 hit.
InterProiView protein in InterPro
IPR033897. MADS_SRF-like.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS50066. MADS_BOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LZ61-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGVKRKISI ELIEKKDSRA VAFSKRSRGL YSKASDLCLL SDAQIAIIAT
60 70 80 90 100
PVSSKSNVSF YTFGHSSVDN VVAAFLTNQR PREGLGLDYW WEDERLSKSE
110 120 130 140 150
DLEELRDAMD SMSKMLKDLK DLQNQRDCEE DVKKKGVLHG THQKQTFNPE
160 170 180 190 200
SCSVNFDGFN KNTEEFDLDE IFDYVSTAEA LSMNLDMDDV SVVTTNQNPV
210 220 230 240 250
SASETVEDRE LVVHKNMDED NIHVSDMDDK DTMLMISDKN NVLPENLDEF
260 270 280 290 300
DQELDLDQLL DFETNYESLL KSCEMEDYAS MVTTKQNLCS NPEAVEDGGL
310 320
MIQKDLPEDN LCFSDYFSDL HC
Length:322
Mass (Da):36,554
Last modified:October 1, 2000 - v1
Checksum:i7DF8EAF0B104C5EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ056669 mRNA. Translation: AAY78815.1.
CP002688 Genomic DNA. Translation: AED90768.1.
AL162875 Genomic DNA. Translation: CAB85570.1.
PIRiT48460.
RefSeqiNP_196084.1. NM_120546.2.
UniGeneiAt.54720.

Genome annotation databases

EnsemblPlantsiAT5G04640.1; AT5G04640.1; AT5G04640.
GeneIDi830341.
GrameneiAT5G04640.1; AT5G04640.1; AT5G04640.
KEGGiath:AT5G04640.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ056669 mRNA. Translation: AAY78815.1.
CP002688 Genomic DNA. Translation: AED90768.1.
AL162875 Genomic DNA. Translation: CAB85570.1.
PIRiT48460.
RefSeqiNP_196084.1. NM_120546.2.
UniGeneiAt.54720.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G04640.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G04640.1; AT5G04640.1; AT5G04640.
GeneIDi830341.
GrameneiAT5G04640.1; AT5G04640.1; AT5G04640.
KEGGiath:AT5G04640.

Organism-specific databases

AraportiAT5G04640.
TAIRilocus:2184427. AT5G04640.

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000033848.
OMAiRDAMDSM.
OrthoDBiEOG09360PZ0.

Family and domain databases

CDDicd00266. MADS_SRF_like. 1 hit.
InterProiView protein in InterPro
IPR033897. MADS_SRF-like.
IPR002100. TF_MADSbox.
PfamiView protein in Pfam
PF00319. SRF-TF. 1 hit.
PRINTSiPR00404. MADSDOMAIN.
SMARTiView protein in SMART
SM00432. MADS. 1 hit.
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiView protein in PROSITE
PS50066. MADS_BOX_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9LZ61_ARATH
AccessioniPrimary (citable) accession number: Q9LZ61
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: April 12, 2017
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.