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Protein

Protein NRT1/ PTR FAMILY 6.1

Gene

NPF6.1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport

Enzyme and pathway databases

ReactomeiR-ATH-427975 Proton/oligopeptide cotransporters
R-ATH-6798695 Neutrophil degranulation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein NRT1/ PTR FAMILY 6.1
Short name:
AtNPF6.1
Gene namesi
Name:NPF6.1
Ordered Locus Names:At5g13400
ORF Names:T22N19.50
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G13400
TAIRilocus:2181655 AT5G13400

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei83 – 100HelicalSequence analysisAdd BLAST18
Transmembranei114 – 134HelicalSequence analysisAdd BLAST21
Transmembranei139 – 159HelicalSequence analysisAdd BLAST21
Transmembranei184 – 204HelicalSequence analysisAdd BLAST21
Transmembranei230 – 250HelicalSequence analysisAdd BLAST21
Transmembranei258 – 278HelicalSequence analysisAdd BLAST21
Transmembranei378 – 398HelicalSequence analysisAdd BLAST21
Transmembranei422 – 442HelicalSequence analysisAdd BLAST21
Transmembranei459 – 479HelicalSequence analysisAdd BLAST21
Transmembranei504 – 524HelicalSequence analysisAdd BLAST21
Transmembranei537 – 557HelicalSequence analysisAdd BLAST21
Transmembranei585 – 605HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003999831 – 624Protein NRT1/ PTR FAMILY 6.1Add BLAST624

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei138PhosphothreonineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ9LYR6

PTM databases

iPTMnetiQ9LYR6

Expressioni

Tissue specificityi

Expressed in flower and siliques.1 Publication

Gene expression databases

ExpressionAtlasiQ9LYR6 baseline and differential
GenevisibleiQ9LYR6 AT

Interactioni

Protein-protein interaction databases

BioGridi16459, 31 interactors
STRINGi3702.AT5G13400.1

Structurei

3D structure databases

ProteinModelPortaliQ9LYR6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1237 Eukaryota
COG3104 LUCA
HOGENOMiHOG000237400
InParanoidiQ9LYR6
OMAiTPVNIHG
OrthoDBiEOG093607P9
PhylomeDBiQ9LYR6

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR020846 MFS_dom
IPR036259 MFS_trans_sf
IPR000109 POT_fam
IPR018456 PTR2_symporter_CS
PANTHERiPTHR11654 PTHR11654, 1 hit
PfamiView protein in Pfam
PF00854 PTR2, 1 hit
SUPFAMiSSF103473 SSF103473, 3 hits
PROSITEiView protein in PROSITE
PS01022 PTR2_1, 1 hit

Sequencei

Sequence statusi: Complete.

Q9LYR6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVASEIKSPV SVPETPGSSS VHHRKQLSVF FIESDNRRLA LGRGYTGGTT
60 70 80 90 100
PVNIHGKPIA NLSKTGGWIA AFFIFGNEMA ERMAYFGLSV NMVAFMFYVM
110 120 130 140 150
HRPFESSSNA VNNFLGISQA SSVLGGFLAD AYLGRYWTIA IFTTMYLVGL
160 170 180 190 200
IGITLGASLK MFVPDQSNCG QLSLLLGNCE EAKSWQMLYL YTVLYITGFG
210 220 230 240 250
AAGIRPCVSS FGADQFDEKS KDYKTHLDRF FNFFYLSVTL GAIIAFTLVV
260 270 280 290 300
YVQMELGWGM AFGTLAVAMG ISNALFFAGT PLYRHRLPGG SPLTRVAQVL
310 320 330 340 350
VAAFRKRNAA FTSSEFIGLY EVPGLKSAIN GSRKIPHSND FIWLDKAALE
360 370 380 390 400
LKEDGLEPSP WKLCTVTQVE EVKILIRLIP IPTCTIMLSL VLTEYLTLSV
410 420 430 440 450
QQAYTLNTHI QHLKLPVTCM PVFPGLSIFL ILSLYYSVFV PITRRITGNP
460 470 480 490 500
HGASQLQRVG IGLAVSIISV AWAGLFENYR RHYAIQNGFE FNFLTQMPDL
510 520 530 540 550
TAYWLLIQYC LIGIAEVFCI VGLLEFLYEE APDAMKSIGS AYAALAGGLG
560 570 580 590 600
CFAATILNNI VKAATRDSDG KSWLSQNINT GRFDCLYWLL TLLSFLNFCV
610 620
FLWSAHRYKY RAIESEEDKS SAVL
Length:624
Mass (Da):69,075
Last modified:October 1, 2000 - v1
Checksum:i3D74D80A9C3C635A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL163572 Genomic DNA Translation: CAB87147.1
CP002688 Genomic DNA Translation: AED91890.1
AY072338 mRNA Translation: AAL61945.1
AY128754 mRNA Translation: AAM91154.1
PIRiT48587
RefSeqiNP_196844.1, NM_121343.5
UniGeneiAt.49014
At.69699

Genome annotation databases

EnsemblPlantsiAT5G13400.1; AT5G13400.1; AT5G13400
GeneIDi831181
GrameneiAT5G13400.1; AT5G13400.1; AT5G13400
KEGGiath:AT5G13400

Similar proteinsi

Entry informationi

Entry nameiPTR49_ARATH
AccessioniPrimary (citable) accession number: Q9LYR6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 2, 2010
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health