Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

40S ribosomal protein S26-3

Gene

RPS26C

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: GO_Central
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-ATH-72702 Ribosomal scanning and start codon recognition
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S26-3
Gene namesi
Name:RPS26C
Ordered Locus Names:At3g56340
ORF Names:F18O21_300
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G56340
TAIRilocus:2078491 AT3G56340

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002505371 – 13040S ribosomal protein S26-3Add BLAST130

Proteomic databases

PaxDbiQ9LYK9
PRIDEiQ9LYK9

PTM databases

iPTMnetiQ9LYK9

Expressioni

Gene expression databases

ExpressionAtlasiQ9LYK9 baseline and differential
GenevisibleiQ9LYK9 AT

Interactioni

Protein-protein interaction databases

BioGridi10117, 1 interactor
IntActiQ9LYK9, 1 interactor
STRINGi3702.AT3G56340.1

Structurei

3D structure databases

ProteinModelPortaliQ9LYK9
SMRiQ9LYK9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1768 Eukaryota
COG4830 LUCA
HOGENOMiHOG000108824
InParanoidiQ9LYK9
KOiK02976
OMAiDKAICVT
OrthoDBiEOG09360YU3
PhylomeDBiQ9LYK9

Family and domain databases

Gene3Di3.30.1740.20, 1 hit
InterProiView protein in InterPro
IPR000892 Ribosomal_S26e
IPR038551 Ribosomal_S26e_sf
PANTHERiPTHR12538 PTHR12538, 1 hit
PfamiView protein in Pfam
PF01283 Ribosomal_S26e, 1 hit
PROSITEiView protein in PROSITE
PS00733 RIBOSOMAL_S26E, 1 hit

Sequencei

Sequence statusi: Complete.

Q9LYK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTFKRRNGGR NKHNRGHVKP IRCSNCGKCC PKDKAIKRFI VRNIVEQAAI
60 70 80 90 100
RDVQEASVYE GYTLPKLYAK TQYCVSCAIH SHVVRVRSRT NRRVRTPPPR
110 120 130
FARRKEDTPK PAQPGQAPRP AGGAPAAPRA
Length:130
Mass (Da):14,628
Last modified:October 1, 2000 - v1
Checksum:iE82716F04E3EAA6E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL163763 Genomic DNA Translation: CAB87433.1
CP002686 Genomic DNA Translation: AEE79511.1
AY039886 mRNA Translation: AAK63990.1
AY133664 mRNA Translation: AAM91494.1
PIRiT47751
RefSeqiNP_191193.1, NM_115492.4
UniGeneiAt.5076

Genome annotation databases

EnsemblPlantsiAT3G56340.1; AT3G56340.1; AT3G56340
GeneIDi824801
GrameneiAT3G56340.1; AT3G56340.1; AT3G56340
KEGGiath:AT3G56340

Similar proteinsi

Entry informationi

Entry nameiRS263_ARATH
AccessioniPrimary (citable) accession number: Q9LYK9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health