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Q9LY62 (Q9LY62_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Nucleotide-diphospho-sugar transferase-like protein EMBL AEE79446.1
Submitted name:
Putative uncharacterized protein At3g55830 EMBL BAF00425.1
Submitted name:
Putative uncharacterized protein F27K19_10 EMBL CAB87837.1
Gene names
Name:F27K19_10 EMBL CAB87837.1
Synonyms:EPC1 EMBL AEE79446.1
Ordered Locus Names:At3g55830 TAIR At3g55830 EMBL BAF00425.1
ORF Names:AT3G55830 EMBL AEE79446.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAB87837.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length334 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9LY62 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 2E41E5600D36B5B9

FASTA33438,300
        10         20         30         40         50         60 
MGGGEVSKEM GACSLAYRRG DQKLRKFVTA RSTKFLLFCC IAFVLVTIVC RSSRPWVNSS 

        70         80         90        100        110        120 
IAVADRISGS RKGYTLLMNT WKRYDLLKKS VSHYASCSRL DSIHIVWSEP NPPSESLKEY 

       130        140        150        160        170        180 
LHNVLKKKTR DGHEVELRFD INKEDSLNNR FKEIKDLKTD AVFSIDDDII FPCHTVDFAF 

       190        200        210        220        230        240 
NVWESAPDTM VGFVPRVHWP EKSNDKANYY TYSGWWSVWW SGTYSMVLSK AAFFHKKYLS 

       250        260        270        280        290        300 
LYTNSMPASI REFTTKNRNC EDIAMSFLIA NATNAPAIWV KGKIYEIGST GISSIGGHTE 

       310        320        330 
KRTHCVNRFV AEFGKMPLVY TSMKAVDSRN LWFW

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed: 11130713] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]Arabidopsis TAIR10 Release
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]EU Arabidopsis sequencing project
Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]Benes V., Wurmbach E., Drzonek H., Ansorge W., Mewes H.W., Rudd S., Lemcke K., Mayer K.F.X., Quetier F., Salanoubat M.
Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K. expand/collapse author list , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002686 Genomic DNA. Translation: AEE79446.1.
AK228499 mRNA. Translation: BAF00425.1.
AL163832 Genomic DNA. Translation: CAB87837.1.
IPIIPI00519739.
PIRT49195.
RefSeqNP_191142.1. NM_115441.3.
UniGeneAt.19788.
At.70251.

3D structure databases

HSSPHSSP built from PDB template 1OMZ based on UniProtKB Q9ES89.
ProteinModelPortalQ9LY62.
SMRQ9LY62. Positions 71-328.
ModBaseSearch...

Protein family/group databases

CAZyGT64. Glycosyltransferase Family 64.

Proteomic databases

PRIDEQ9LY62.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT3G55830.1; AT3G55830.1; AT3G55830.
GeneID824749.
GenomeReviewsGene locus AT3G55830 in contig BA000014_GR.
KEGGath:AT3G55830.
NMPDRfig|3702.1.peg.16905.

Organism-specific databases

TAIRAt3g55830.

Phylogenomic databases

eggNOGKOG1022.
GeneTreeEPGT00070000029100.
HOGENOMHBG607728.
InParanoidQ9LY62.
OMAKAVDSRR.
PhylomeDBQ9LY62.
ProtClustDBCLSN2684135.

Gene expression databases

GenevestigatorQ9LY62.

Family and domain databases

InterProIPR015338. HexNAc_Trfase_a.
[Graphical view]
PfamPF09258. Glyco_transf_64. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9LY62_ARATH
AccessionPrimary (citable) accession number: Q9LY62
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info