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Q9LW55 (FB180_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative F-box protein At3g23420
Gene names
Ordered Locus Names:At3g23420
ORF Names:MLM24.15
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length268 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 F-box domain.

Sequence caution

The sequence AEE76763.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 268268Putative F-box protein At3g23420
PRO_0000283450

Regions

Domain5 – 5147F-box

Sequences

Sequence LengthMass (Da)Tools
Q9LW55 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 16AB994116BD8C4B

FASTA26831,556
        10         20         30         40         50         60 
MSNLPRDLSD LPRNMAEEVL SRVPMTSLRR LRFTCKKWNT LSRCRSFAKK HLVCQAKVAA 

        70         80         90        100        110        120 
KKREYKVVMM MDFRVYLMRI NLQNNVELCI KRERELLFPD ASDQIYVRHV FHCDGLLLCI 

       130        140        150        160        170        180 
MKDNPRLVVC NPYSGQTRWI ETTNNPQRLD AYSYALGYNS STKSHKILSF GMMFDYVSST 

       190        200        210        220        230        240 
SAEFKIYDFN SDSWRLAVLF QRMDTLQMEI WVTTKIEPNT VSWSSKFFLS VDMRELTGRY 

       250        260 
SMFSFSDASF FIDEEKKVAV VFDKGKKK 

« Hide

References

« Hide 'large scale' references
[1]"Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.
DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.

Web resources

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB015474 Genomic DNA. Translation: BAB02286.1.
CP002686 Genomic DNA. Translation: AEE76763.1. Sequence problems.
RefSeqNP_188984.1. NM_113245.1.
UniGeneAt.53459.

3D structure databases

ProteinModelPortalQ9LW55.
SMRQ9LW55. Positions 8-47.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ9LW55.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID821923.
KEGGath:AT3G23420.

Organism-specific databases

TAIRAT3G23420.

Phylogenomic databases

InParanoidQ9LW55.
PhylomeDBQ9LW55.

Gene expression databases

GenevestigatorQ9LW55.

Family and domain databases

InterProIPR006527. F-box-assoc_dom_typ1.
IPR017451. F-box-assoc_interact_dom.
IPR001810. F-box_dom.
[Graphical view]
PfamPF00646. F-box. 1 hit.
PF07734. FBA_1. 1 hit.
[Graphical view]
SMARTSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMSSF81383. SSF81383. 2 hits.
TIGRFAMsTIGR01640. F_box_assoc_1. 1 hit.
PROSITEPS50181. FBOX. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameFB180_ARATH
AccessionPrimary (citable) accession number: Q9LW55
Secondary accession number(s): F4J428
Entry history
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: October 1, 2000
Last modified: February 19, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names