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Q9LW44

- MANP_ARATH

UniProt

Q9LW44 - MANP_ARATH

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Protein

Putative mannan endo-1,4-beta-mannosidase P

Gene

MANP

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Protein uncertaini

Functioni

Catalytic activityi

Random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei202 – 2021Proton donorBy similarity
Active sitei322 – 3221NucleophileBy similarity

GO - Molecular functioni

  1. mannan endo-1,4-beta-mannosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Enzyme and pathway databases

BioCyciARA:AT3G30540-MONOMER.

Protein family/group databases

CAZyiGH5. Glycoside Hydrolase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative mannan endo-1,4-beta-mannosidase P (EC:3.2.1.78)
Alternative name(s):
Beta-mannanase P
Endo-beta-1,4-mannanase P
Short name:
AtMANP
Gene namesi
Name:MANP
Ordered Locus Names:At3g30540
ORF Names:MQP15.18
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G30540.

Subcellular locationi

Secreted Curated

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323Sequence AnalysisAdd
BLAST
Chaini24 – 408385Putative mannan endo-1,4-beta-mannosidase PPRO_0000277481Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi73 – 731N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Expressioni

Gene expression databases

GenevestigatoriQ9LW44.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G30540.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9LW44.
SMRiQ9LW44. Positions 27-402.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG3934.
InParanoidiQ9LW44.
PhylomeDBiQ9LW44.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00150. Cellulase. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9LW44 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKCLCFIVLL AIVIAQSYVG VEAAPSDGFV SRNGVQFILN GKPFYANGFN
60 70 80 90 100
AYWLAYEATD PATRFKITNV FQNATSLGLT IARTWGFRNG AIYRALQTAP
110 120 130 140 150
GSYDEQTFQG LDFGIAEAKR VGIKLIIPLV NNWDDYGGKK QYVDWARSKG
160 170 180 190 200
EMVSSNDDFY RNPVIKEFYK NHVKTMLNRV NTFTKVAYKD EPASMAWQLM
210 220 230 240 250
NEPRCGVDRS GKTLMAWINE MALFVKSVDP NHLLSTGHEG FYGDSSPERK
260 270 280 290 300
NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK
310 320 330 340 350
RWLEGHIEDA QNNLKKPVIL AEFGLGSDTP RYTLANRDDV FTTTYDIIYI
360 370 380 390 400
STQKGGSAAG ALFWEVISEG VSNFAGPSSI ILSDKSSTVN IISEQRRKMG

LLGGTKGK
Length:408
Mass (Da):45,356
Last modified:February 8, 2011 - v3
Checksum:i5536B88BF62A373A
GO

Sequence cautioni

The sequence AEE77650.1 differs from that shown. Reason: Frameshift at position 350.
The sequence BAB01021.1 differs from that shown. Reason: Frameshift at position 350.
The sequence AEE77650.1 differs from that shown. Reason: Erroneous termination at position 85. Translated as Trp.
The sequence BAB01021.1 differs from that shown. Reason: Erroneous termination at position 85. Translated as Trp.
The sequence AEE77650.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence BAB01021.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB016878 Genomic DNA. Translation: BAB01021.1. Sequence problems.
CP002686 Genomic DNA. Translation: AEE77650.1. Sequence problems.
RefSeqiNP_189675.2. NM_113955.2.
UniGeneiAt.53601.

Genome annotation databases

EnsemblPlantsiAT3G10900.1; AT3G10900.1; AT3G10900.
GeneIDi822768.
KEGGiath:AT3G30540.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB016878 Genomic DNA. Translation: BAB01021.1 . Sequence problems.
CP002686 Genomic DNA. Translation: AEE77650.1 . Sequence problems.
RefSeqi NP_189675.2. NM_113955.2.
UniGenei At.53601.

3D structure databases

ProteinModelPortali Q9LW44.
SMRi Q9LW44. Positions 27-402.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT3G30540.1-P.

Protein family/group databases

CAZyi GH5. Glycoside Hydrolase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G10900.1 ; AT3G10900.1 ; AT3G10900 .
GeneIDi 822768.
KEGGi ath:AT3G30540.

Organism-specific databases

TAIRi AT3G30540.

Phylogenomic databases

eggNOGi COG3934.
InParanoidi Q9LW44.
PhylomeDBi Q9LW44.

Enzyme and pathway databases

BioCyci ARA:AT3G30540-MONOMER.

Gene expression databases

Genevestigatori Q9LW44.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001547. Glyco_hydro_5.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF00150. Cellulase. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
    Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.
    DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar."
    Yuan J.S., Yang X., Lai J., Lin H., Cheng Z.-M., Nonogaki H., Chen F.
    Funct. Integr. Genomics 7:1-16(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY.

Entry informationi

Entry nameiMANP_ARATH
AccessioniPrimary (citable) accession number: Q9LW44
Secondary accession number(s): F4J6N6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: February 8, 2011
Last modified: October 29, 2014
This is version 75 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3