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Q9LW44

- MANP_ARATH

UniProt

Q9LW44 - MANP_ARATH

Protein

Putative mannan endo-1,4-beta-mannosidase P

Gene

MANP

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Protein uncertaini
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 3 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei202 – 2021Proton donorBy similarity
    Active sitei322 – 3221NucleophileBy similarity

    GO - Molecular functioni

    1. mannan endo-1,4-beta-mannosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Enzyme and pathway databases

    BioCyciARA:AT3G30540-MONOMER.

    Protein family/group databases

    CAZyiGH5. Glycoside Hydrolase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative mannan endo-1,4-beta-mannosidase P (EC:3.2.1.78)
    Alternative name(s):
    Beta-mannanase P
    Endo-beta-1,4-mannanase P
    Short name:
    AtMANP
    Gene namesi
    Name:MANP
    Ordered Locus Names:At3g30540
    ORF Names:MQP15.18
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 3

    Organism-specific databases

    TAIRiAT3G30540.

    Subcellular locationi

    Secreted Curated

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2323Sequence AnalysisAdd
    BLAST
    Chaini24 – 408385Putative mannan endo-1,4-beta-mannosidase PPRO_0000277481Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi73 – 731N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Expressioni

    Gene expression databases

    GenevestigatoriQ9LW44.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT3G30540.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9LW44.
    SMRiQ9LW44. Positions 27-402.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG3934.
    InParanoidiQ9LW44.
    PhylomeDBiQ9LW44.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001547. Glyco_hydro_5.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF00150. Cellulase. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9LW44-1 [UniParc]FASTAAdd to Basket

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    MKCLCFIVLL AIVIAQSYVG VEAAPSDGFV SRNGVQFILN GKPFYANGFN    50
    AYWLAYEATD PATRFKITNV FQNATSLGLT IARTWGFRNG AIYRALQTAP 100
    GSYDEQTFQG LDFGIAEAKR VGIKLIIPLV NNWDDYGGKK QYVDWARSKG 150
    EMVSSNDDFY RNPVIKEFYK NHVKTMLNRV NTFTKVAYKD EPASMAWQLM 200
    NEPRCGVDRS GKTLMAWINE MALFVKSVDP NHLLSTGHEG FYGDSSPERK 250
    NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK 300
    RWLEGHIEDA QNNLKKPVIL AEFGLGSDTP RYTLANRDDV FTTTYDIIYI 350
    STQKGGSAAG ALFWEVISEG VSNFAGPSSI ILSDKSSTVN IISEQRRKMG 400
    LLGGTKGK 408
    Length:408
    Mass (Da):45,356
    Last modified:February 8, 2011 - v3
    Checksum:i5536B88BF62A373A
    GO

    Sequence cautioni

    The sequence AEE77650.1 differs from that shown. Reason: Frameshift at position 350.
    The sequence BAB01021.1 differs from that shown. Reason: Frameshift at position 350.
    The sequence AEE77650.1 differs from that shown. Reason: Erroneous termination at position 85. Translated as Trp.
    The sequence BAB01021.1 differs from that shown. Reason: Erroneous termination at position 85. Translated as Trp.
    The sequence AEE77650.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence BAB01021.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB016878 Genomic DNA. Translation: BAB01021.1. Sequence problems.
    CP002686 Genomic DNA. Translation: AEE77650.1. Sequence problems.
    RefSeqiNP_189675.2. NM_113955.2.
    UniGeneiAt.53601.

    Genome annotation databases

    EnsemblPlantsiAT3G10900.1; AT3G10900.1; AT3G10900.
    GeneIDi822768.
    KEGGiath:AT3G30540.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB016878 Genomic DNA. Translation: BAB01021.1 . Sequence problems.
    CP002686 Genomic DNA. Translation: AEE77650.1 . Sequence problems.
    RefSeqi NP_189675.2. NM_113955.2.
    UniGenei At.53601.

    3D structure databases

    ProteinModelPortali Q9LW44.
    SMRi Q9LW44. Positions 27-402.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT3G30540.1-P.

    Protein family/group databases

    CAZyi GH5. Glycoside Hydrolase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT3G10900.1 ; AT3G10900.1 ; AT3G10900 .
    GeneIDi 822768.
    KEGGi ath:AT3G30540.

    Organism-specific databases

    TAIRi AT3G30540.

    Phylogenomic databases

    eggNOGi COG3934.
    InParanoidi Q9LW44.
    PhylomeDBi Q9LW44.

    Enzyme and pathway databases

    BioCyci ARA:AT3G30540-MONOMER.

    Gene expression databases

    Genevestigatori Q9LW44.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001547. Glyco_hydro_5.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF00150. Cellulase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
      Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.
      DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar."
      Yuan J.S., Yang X., Lai J., Lin H., Cheng Z.-M., Nonogaki H., Chen F.
      Funct. Integr. Genomics 7:1-16(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY.

    Entry informationi

    Entry nameiMANP_ARATH
    AccessioniPrimary (citable) accession number: Q9LW44
    Secondary accession number(s): F4J6N6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 6, 2007
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 74 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Caution

    Could be the product of a pseudogene.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3