Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

AP2-like ethylene-responsive transcription factor TOE2

Gene

TOE2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay.By similarity1 Publication

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi160 – 21657AP2/ERFPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Ethylene signaling pathway, Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
AP2-like ethylene-responsive transcription factor TOE2
Alternative name(s):
Protein TARGET OF EAT 2
Gene namesi
Name:TOE2
Ordered Locus Names:At5g60120
ORF Names:MGO3.10
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G60120.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 485485AP2-like ethylene-responsive transcription factor TOE2PRO_0000290366Add
BLAST

Proteomic databases

PaxDbiQ9LVG2.
PRIDEiQ9LVG2.

Expressioni

Inductioni

Repressed by miR172a-2/EAT.1 Publication

Gene expression databases

ExpressionAtlasiQ9LVG2. baseline and differential.
GenevisibleiQ9LVG2. AT.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
KIN11P929582EBI-4424568,EBI-307202

Protein-protein interaction databases

BioGridi21378. 33 interactions.
IntActiQ9LVG2. 27 interactions.
STRINGi3702.AT5G60120.2.

Structurei

3D structure databases

ProteinModelPortaliQ9LVG2.
SMRiQ9LVG2. Positions 160-218.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 AP2/ERF DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410JXDU. Eukaryota.
ENOG4110426. LUCA.
HOGENOMiHOG000293136.
InParanoidiQ9LVG2.
PhylomeDBiQ9LVG2.

Family and domain databases

Gene3Di3.30.730.10. 1 hit.
InterProiIPR031112. AP2-like_transcript_factor.
IPR001471. AP2/ERF_dom.
IPR016177. DNA-bd_dom.
[Graphical view]
PANTHERiPTHR32467. PTHR32467. 1 hit.
PfamiPF00847. AP2. 1 hit.
[Graphical view]
SMARTiSM00380. AP2. 1 hit.
[Graphical view]
SUPFAMiSSF54171. SSF54171. 1 hit.
PROSITEiPS51032. AP2_ERF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

This entry describes 1 isoform i produced by alternative splicing. AlignAdd to basket

Note: A number of isoforms are produced. According to EST sequences.

Isoform 1 (identifier: Q9LVG2-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MLDLNLDVDS TESTQNERDS ITVKGVSLNQ MDESVTSNSS VVNAEASSCI
60 70 80 90 100
DGEDELCSTR TVKFQFEILK GGGEEEEEDD DERSAVMMTK EFFPVAKGMN
110 120 130 140 150
FMDSSAQSSR STVDISFQRG KQGGDFIGSG SGGGDASRVM QPPSQPVKKS
160 170 180 190 200
RRGPRSKSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD
210 220 230 240 250
RAAVKFRGLE ADINFVIGDY EEDLKQMANL SKEEVVQVLR RQSSGFSRNN
260 270 280 290 300
SRYQGVALQK IGGWGAQMEQ LHGNMGCDKA AVQWKGREAA SLIEPHASRM
310 320 330 340 350
IPEAANVKLD LNLGISLSLG DGPKQKDRAL RLHHVPNNSV CGRNTMMENH
360 370 380 390 400
MAAAACDTPF NFLKRGSDHL NNRHALPSAF FSPMERTPEK GLMLRSHQSF
410 420 430 440 450
PARTWQGHDQ SSGGTAVAAT APPLFSNAAS SGFSLSATRP PSSTAIHHPS
460 470 480
QPFVNLNQPG LYVIHPSDYI SQHQHNLMNR PQPPP
Length:485
Mass (Da):53,164
Last modified:October 1, 2000 - v1
Checksum:iBEFB290E407FC3D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB019231 Genomic DNA. Translation: BAA96941.1.
CP002688 Genomic DNA. Translation: AED97280.1.
BT001916 mRNA. Translation: AAN71915.1.
RefSeqiNP_200820.3. NM_125405.3. [Q9LVG2-1]
UniGeneiAt.29184.

Genome annotation databases

EnsemblPlantsiAT5G60120.1; AT5G60120.1; AT5G60120. [Q9LVG2-1]
GeneIDi836134.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB019231 Genomic DNA. Translation: BAA96941.1.
CP002688 Genomic DNA. Translation: AED97280.1.
BT001916 mRNA. Translation: AAN71915.1.
RefSeqiNP_200820.3. NM_125405.3. [Q9LVG2-1]
UniGeneiAt.29184.

3D structure databases

ProteinModelPortaliQ9LVG2.
SMRiQ9LVG2. Positions 160-218.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi21378. 33 interactions.
IntActiQ9LVG2. 27 interactions.
STRINGi3702.AT5G60120.2.

Proteomic databases

PaxDbiQ9LVG2.
PRIDEiQ9LVG2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G60120.1; AT5G60120.1; AT5G60120. [Q9LVG2-1]
GeneIDi836134.

Organism-specific databases

TAIRiAT5G60120.

Phylogenomic databases

eggNOGiENOG410JXDU. Eukaryota.
ENOG4110426. LUCA.
HOGENOMiHOG000293136.
InParanoidiQ9LVG2.
PhylomeDBiQ9LVG2.

Miscellaneous databases

PROiQ9LVG2.

Gene expression databases

ExpressionAtlasiQ9LVG2. baseline and differential.
GenevisibleiQ9LVG2. AT.

Family and domain databases

Gene3Di3.30.730.10. 1 hit.
InterProiIPR031112. AP2-like_transcript_factor.
IPR001471. AP2/ERF_dom.
IPR016177. DNA-bd_dom.
[Graphical view]
PANTHERiPTHR32467. PTHR32467. 1 hit.
PfamiPF00847. AP2. 1 hit.
[Graphical view]
SMARTiSM00380. AP2. 1 hit.
[Graphical view]
SUPFAMiSSF54171. SSF54171. 1 hit.
PROSITEiPS51032. AP2_ERF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence features of the regions of 3,076,755 bp covered by sixty P1 and TAC clones."
    Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H., Tabata S.
    DNA Res. 7:31-63(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes."
    Aukerman M.J., Sakai H.
    Plant Cell 15:2730-2741(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, INDUCTION.
  5. "Genome-wide analysis of the ERF gene family in Arabidopsis and rice."
    Nakano T., Suzuki K., Fujimura T., Shinshi H.
    Plant Physiol. 140:411-432(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiTOE2_ARATH
AccessioniPrimary (citable) accession number: Q9LVG2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 12, 2007
Last sequence update: October 1, 2000
Last modified: May 11, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.