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Protein

Uncharacterized protein At5g48480

Gene

At5g48480

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein At5g48480
Gene namesi
Ordered Locus Names:At5g48480
ORF Names:MJE7.12
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G48480.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedCombined sources
ChainiPRO_00002206212 – 166Uncharacterized protein At5g48480Add BLAST165

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9LV66.
PRIDEiQ9LV66.

Expressioni

Gene expression databases

GenevisibleiQ9LV66. AT.

Interactioni

Subunit structurei

Homodimer.1 Publication

Protein-protein interaction databases

STRINGi3702.AT5G48480.1.

Structurei

Secondary structure

1166
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi24 – 32Combined sources9
Helixi37 – 48Combined sources12
Beta strandi54 – 56Combined sources3
Beta strandi72 – 77Combined sources6
Beta strandi80 – 86Combined sources7
Helixi87 – 89Combined sources3
Beta strandi104 – 108Combined sources5
Helixi112 – 121Combined sources10
Helixi131 – 135Combined sources5
Beta strandi138 – 143Combined sources6
Beta strandi149 – 153Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XY7X-ray1.80A/B1-166[»]
2Q48X-ray1.80A/B1-166[»]
ProteinModelPortaliQ9LV66.
SMRiQ9LV66.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9LV66.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J2F2. Eukaryota.
ENOG410YUXH. LUCA.
HOGENOMiHOG000155384.
InParanoidiQ9LV66.
OMAiPFGVTWI.
OrthoDBiEOG09360YVY.
PhylomeDBiQ9LV66.

Family and domain databases

Gene3Di3.10.180.10. 1 hit.
InterProiIPR029068. Glyas_Bleomycin-R_OHBP_Dase.
[Graphical view]
SUPFAMiSSF54593. SSF54593. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9LV66-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQEDVTAVA TNGAGPVETH LVFTEFKQML LVEAQKVGDA VTFYKSAFGA
60 70 80 90 100
IESGHSLYPK RKLDQELPHV LSSELNLAGS SFVVCDVSSL PGFSTAKSEG
110 120 130 140 150
SGVTFLLGTK DAEAAVAKAV DAGAVKVEVT EAEVELGFKG KVTDPFGVTW
160
IFAEKKTVIT DENKEV
Length:166
Mass (Da):17,557
Last modified:October 1, 2000 - v1
Checksum:i032746AFCB670630
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB020745 Genomic DNA. Translation: BAA96968.1.
CP002688 Genomic DNA. Translation: AED95675.1.
AY074359 mRNA. Translation: AAL67055.1.
AY133780 mRNA. Translation: AAM91714.1.
AY087100 mRNA. Translation: AAM64659.1.
RefSeqiNP_568698.1. NM_124223.4.
UniGeneiAt.20821.
At.68124.

Genome annotation databases

EnsemblPlantsiAT5G48480.1; AT5G48480.1; AT5G48480.
GeneIDi834903.
GrameneiAT5G48480.1; AT5G48480.1; AT5G48480.
KEGGiath:AT5G48480.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB020745 Genomic DNA. Translation: BAA96968.1.
CP002688 Genomic DNA. Translation: AED95675.1.
AY074359 mRNA. Translation: AAL67055.1.
AY133780 mRNA. Translation: AAM91714.1.
AY087100 mRNA. Translation: AAM64659.1.
RefSeqiNP_568698.1. NM_124223.4.
UniGeneiAt.20821.
At.68124.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XY7X-ray1.80A/B1-166[»]
2Q48X-ray1.80A/B1-166[»]
ProteinModelPortaliQ9LV66.
SMRiQ9LV66.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G48480.1.

Proteomic databases

PaxDbiQ9LV66.
PRIDEiQ9LV66.

Protocols and materials databases

DNASUi834903.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G48480.1; AT5G48480.1; AT5G48480.
GeneIDi834903.
GrameneiAT5G48480.1; AT5G48480.1; AT5G48480.
KEGGiath:AT5G48480.

Organism-specific databases

TAIRiAT5G48480.

Phylogenomic databases

eggNOGiENOG410J2F2. Eukaryota.
ENOG410YUXH. LUCA.
HOGENOMiHOG000155384.
InParanoidiQ9LV66.
OMAiPFGVTWI.
OrthoDBiEOG09360YVY.
PhylomeDBiQ9LV66.

Miscellaneous databases

EvolutionaryTraceiQ9LV66.
PROiQ9LV66.

Gene expression databases

GenevisibleiQ9LV66. AT.

Family and domain databases

Gene3Di3.10.180.10. 1 hit.
InterProiIPR029068. Glyas_Bleomycin-R_OHBP_Dase.
[Graphical view]
SUPFAMiSSF54593. SSF54593. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY5848_ARATH
AccessioniPrimary (citable) accession number: Q9LV66
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: October 1, 2000
Last modified: November 30, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.