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Protein

Uncharacterized protein At5g48480

Gene

At5g48480

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein At5g48480
Gene namesi
Ordered Locus Names:At5g48480
ORF Names:MJE7.12
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G48480
TAIRilocus:2165996 AT5G48480

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedCombined sources
ChainiPRO_00002206212 – 166Uncharacterized protein At5g48480Add BLAST165

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9LV66
PRIDEiQ9LV66

PTM databases

iPTMnetiQ9LV66

Expressioni

Gene expression databases

ExpressionAtlasiQ9LV66 baseline and differential
GenevisibleiQ9LV66 AT

Interactioni

Subunit structurei

Homodimer.1 Publication

Protein-protein interaction databases

STRINGi3702.AT5G48480.1

Structurei

Secondary structure

1166
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi24 – 32Combined sources9
Helixi37 – 48Combined sources12
Beta strandi54 – 56Combined sources3
Beta strandi72 – 77Combined sources6
Beta strandi80 – 86Combined sources7
Helixi87 – 89Combined sources3
Beta strandi104 – 108Combined sources5
Helixi112 – 121Combined sources10
Helixi131 – 135Combined sources5
Beta strandi138 – 143Combined sources6
Beta strandi149 – 153Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XY7X-ray1.80A/B1-166[»]
2Q48X-ray1.80A/B1-166[»]
ProteinModelPortaliQ9LV66
SMRiQ9LV66
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9LV66

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J2F2 Eukaryota
ENOG410YUXH LUCA
HOGENOMiHOG000155384
InParanoidiQ9LV66
OMAiPFGVTWI
OrthoDBiEOG09360YVY
PhylomeDBiQ9LV66

Family and domain databases

Gene3Di3.10.180.10, 1 hit
InterProiView protein in InterPro
IPR029068 Glyas_Bleomycin-R_OHBP_Dase
SUPFAMiSSF54593 SSF54593, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9LV66-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQEDVTAVA TNGAGPVETH LVFTEFKQML LVEAQKVGDA VTFYKSAFGA
60 70 80 90 100
IESGHSLYPK RKLDQELPHV LSSELNLAGS SFVVCDVSSL PGFSTAKSEG
110 120 130 140 150
SGVTFLLGTK DAEAAVAKAV DAGAVKVEVT EAEVELGFKG KVTDPFGVTW
160
IFAEKKTVIT DENKEV
Length:166
Mass (Da):17,557
Last modified:October 1, 2000 - v1
Checksum:i032746AFCB670630
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB020745 Genomic DNA Translation: BAA96968.1
CP002688 Genomic DNA Translation: AED95675.1
AY074359 mRNA Translation: AAL67055.1
AY133780 mRNA Translation: AAM91714.1
AY087100 mRNA Translation: AAM64659.1
RefSeqiNP_568698.1, NM_124223.4
UniGeneiAt.20821
At.68124

Genome annotation databases

EnsemblPlantsiAT5G48480.1; AT5G48480.1; AT5G48480
GeneIDi834903
GrameneiAT5G48480.1; AT5G48480.1; AT5G48480
KEGGiath:AT5G48480

Similar proteinsi

Entry informationi

Entry nameiY5848_ARATH
AccessioniPrimary (citable) accession number: Q9LV66
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

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