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Protein

60S ribosomal protein L19-2

Gene

RPL19B

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: TAIR
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L19-2
Gene namesi
Name:RPL19B
Ordered Locus Names:At3g16780
ORF Names:MGL6.25
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G16780
TAIRilocus:2089383 AT3G16780

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001311801 – 20960S ribosomal protein L19-2Add BLAST209

Proteomic databases

PaxDbiQ9LUQ6

PTM databases

iPTMnetiQ9LUQ6

Expressioni

Gene expression databases

ExpressionAtlasiQ9LUQ6 baseline and differential
GenevisibleiQ9LUQ6 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G16780.1

Structurei

3D structure databases

ProteinModelPortaliQ9LUQ6
SMRiQ9LUQ6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1696 Eukaryota
COG2147 LUCA
HOGENOMiHOG000231277
InParanoidiQ9LUQ6
KOiK02885
OMAiMSEIAMA
OrthoDBiEOG09360OFN
PhylomeDBiQ9LUQ6

Family and domain databases

CDDicd01417 Ribosomal_L19e_E, 1 hit
Gene3Di1.10.1650.10, 1 hit
HAMAPiMF_01475 Ribosomal_L19e, 1 hit
InterProiView protein in InterPro
IPR035970 60S_ribosomal_L19/L19e_sf
IPR000196 Ribosomal_L19/L19e
IPR023638 Ribosomal_L19/L19e_CS
IPR015972 Ribosomal_L19/L19e_dom1
IPR033935 Ribosomal_L19_euka
PfamiView protein in Pfam
PF01280 Ribosomal_L19e, 1 hit
SMARTiView protein in SMART
SM01416 Ribosomal_L19e, 1 hit
SUPFAMiSSF48140 SSF48140, 1 hit
PROSITEiView protein in PROSITE
PS00526 RIBOSOMAL_L19E, 1 hit

Sequencei

Sequence statusi: Complete.

Q9LUQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSLKIQKRL AASVMKCGKG KVWLDPNESG DISMANSRQN IRKLVKDGFI
60 70 80 90 100
IRKPTKIHSR SRARALNEAK RKGRHSGYGK RKGTREARLP TKILWMRRMR
110 120 130 140 150
VLRRFLSKYR ESKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKMKAEKA
160 170 180 190 200
REKTLADQFE AKRIKNKASR ERKFARREER LAQGPGGGET TTPAGAPQQP

EVTKKKSKK
Length:209
Mass (Da):24,330
Last modified:October 1, 2000 - v1
Checksum:i33084C8671CA0F30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB022217 Genomic DNA Translation: BAB02770.1
CP002686 Genomic DNA Translation: AEE75864.1
AY045610 mRNA Translation: AAK73968.1
AY090335 mRNA Translation: AAL90996.1
RefSeqiNP_188300.1, NM_112551.4
UniGeneiAt.21317
At.5836

Genome annotation databases

EnsemblPlantsiAT3G16780.1; AT3G16780.1; AT3G16780
GeneIDi820931
GrameneiAT3G16780.1; AT3G16780.1; AT3G16780
KEGGiath:AT3G16780

Similar proteinsi

Entry informationi

Entry nameiRL192_ARATH
AccessioniPrimary (citable) accession number: Q9LUQ6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 13, 2001
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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