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Protein

60S ribosomal protein L19-2

Gene

RPL19B

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-ATH-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-ATH-72689. Formation of a pool of free 40S subunits.
R-ATH-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-ATH-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-ATH-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L19-2
Gene namesi
Name:RPL19B
Ordered Locus Names:At3g16780
ORF Names:MGL6.25
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G16780.

Subcellular locationi

GO - Cellular componenti

  • cytosolic large ribosomal subunit Source: TAIR
  • plasma membrane Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001311801 – 20960S ribosomal protein L19-2Add BLAST209

Proteomic databases

PaxDbiQ9LUQ6.

PTM databases

iPTMnetiQ9LUQ6.

Expressioni

Gene expression databases

GenevisibleiQ9LUQ6. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G16780.1.

Structurei

3D structure databases

ProteinModelPortaliQ9LUQ6.
SMRiQ9LUQ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L19e family.Curated

Phylogenomic databases

eggNOGiKOG1696. Eukaryota.
COG2147. LUCA.
HOGENOMiHOG000231277.
InParanoidiQ9LUQ6.
KOiK02885.
OMAiNRVWIDP.
OrthoDBiEOG09360OFN.
PhylomeDBiQ9LUQ6.

Family and domain databases

CDDicd01417. Ribosomal_L19e_E. 1 hit.
Gene3Di1.10.1200.60. 1 hit.
1.10.1650.10. 1 hit.
HAMAPiMF_01475. Ribosomal_L19e. 1 hit.
InterProiIPR000196. Ribosomal_L19/L19e.
IPR023638. Ribosomal_L19/L19e_CS.
IPR015972. Ribosomal_L19/L19e_dom1.
IPR015974. Ribosomal_L19/L19e_dom3.
IPR033935. Ribosomal_L19_euka.
[Graphical view]
PfamiPF01280. Ribosomal_L19e. 1 hit.
[Graphical view]
SMARTiSM01416. Ribosomal_L19e. 1 hit.
[Graphical view]
SUPFAMiSSF48140. SSF48140. 1 hit.
PROSITEiPS00526. RIBOSOMAL_L19E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9LUQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSLKIQKRL AASVMKCGKG KVWLDPNESG DISMANSRQN IRKLVKDGFI
60 70 80 90 100
IRKPTKIHSR SRARALNEAK RKGRHSGYGK RKGTREARLP TKILWMRRMR
110 120 130 140 150
VLRRFLSKYR ESKKIDRHMY HDMYMKVKGN VFKNKRVLME SIHKMKAEKA
160 170 180 190 200
REKTLADQFE AKRIKNKASR ERKFARREER LAQGPGGGET TTPAGAPQQP

EVTKKKSKK
Length:209
Mass (Da):24,330
Last modified:October 1, 2000 - v1
Checksum:i33084C8671CA0F30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB022217 Genomic DNA. Translation: BAB02770.1.
CP002686 Genomic DNA. Translation: AEE75864.1.
AY045610 mRNA. Translation: AAK73968.1.
AY090335 mRNA. Translation: AAL90996.1.
RefSeqiNP_188300.1. NM_112551.4.
UniGeneiAt.21317.
At.5836.

Genome annotation databases

EnsemblPlantsiAT3G16780.1; AT3G16780.1; AT3G16780.
GeneIDi820931.
GrameneiAT3G16780.1; AT3G16780.1; AT3G16780.
KEGGiath:AT3G16780.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB022217 Genomic DNA. Translation: BAB02770.1.
CP002686 Genomic DNA. Translation: AEE75864.1.
AY045610 mRNA. Translation: AAK73968.1.
AY090335 mRNA. Translation: AAL90996.1.
RefSeqiNP_188300.1. NM_112551.4.
UniGeneiAt.21317.
At.5836.

3D structure databases

ProteinModelPortaliQ9LUQ6.
SMRiQ9LUQ6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT3G16780.1.

PTM databases

iPTMnetiQ9LUQ6.

Proteomic databases

PaxDbiQ9LUQ6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G16780.1; AT3G16780.1; AT3G16780.
GeneIDi820931.
GrameneiAT3G16780.1; AT3G16780.1; AT3G16780.
KEGGiath:AT3G16780.

Organism-specific databases

TAIRiAT3G16780.

Phylogenomic databases

eggNOGiKOG1696. Eukaryota.
COG2147. LUCA.
HOGENOMiHOG000231277.
InParanoidiQ9LUQ6.
KOiK02885.
OMAiNRVWIDP.
OrthoDBiEOG09360OFN.
PhylomeDBiQ9LUQ6.

Enzyme and pathway databases

ReactomeiR-ATH-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-ATH-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-ATH-72689. Formation of a pool of free 40S subunits.
R-ATH-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-ATH-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-ATH-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiQ9LUQ6.

Gene expression databases

GenevisibleiQ9LUQ6. AT.

Family and domain databases

CDDicd01417. Ribosomal_L19e_E. 1 hit.
Gene3Di1.10.1200.60. 1 hit.
1.10.1650.10. 1 hit.
HAMAPiMF_01475. Ribosomal_L19e. 1 hit.
InterProiIPR000196. Ribosomal_L19/L19e.
IPR023638. Ribosomal_L19/L19e_CS.
IPR015972. Ribosomal_L19/L19e_dom1.
IPR015974. Ribosomal_L19/L19e_dom3.
IPR033935. Ribosomal_L19_euka.
[Graphical view]
PfamiPF01280. Ribosomal_L19e. 1 hit.
[Graphical view]
SMARTiSM01416. Ribosomal_L19e. 1 hit.
[Graphical view]
SUPFAMiSSF48140. SSF48140. 1 hit.
PROSITEiPS00526. RIBOSOMAL_L19E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL192_ARATH
AccessioniPrimary (citable) accession number: Q9LUQ6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 13, 2001
Last sequence update: October 1, 2000
Last modified: November 30, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.