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Q9LUP1 (FBK61_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative F-box/kelch-repeat protein At3g17570
Gene names
Ordered Locus Names:At3g17570
ORF Names:MKP6.12
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 F-box domain.

Contains 3 Kelch repeats.

Ontologies

Keywords
   DomainKelch repeat
Repeat
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 381381Putative F-box/kelch-repeat protein At3g17570
PRO_0000283221

Regions

Domain1 – 4545F-box
Repeat151 – 19949Kelch 1
Repeat229 – 28153Kelch 2
Repeat331 – 37949Kelch 3

Sequences

Sequence LengthMass (Da)Tools
Q9LUP1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 4AF917AB126474BF

FASTA38144,467
        10         20         30         40         50         60 
MFTDLPRDLE TEILSRVPAT SLQKLKPTCK RWYTLFKDPE FLKKHVGRAE REVISLMSLR 

        70         80         90        100        110        120 
VYSLSVNLSG IHSSVEMTGM LNSLKDSEDV KISDITECNG LLLCTTDDSR LVVWNPYTGE 

       130        140        150        160        170        180 
TRWIPYKSNS PYEMYQKFVL GYDNTNKSRY SYKILRCYHG LIDFGYEFEI YEFNSHSWRR 

       190        200        210        220        230        240 
FYDNSPNCSF ESKGVTLKGN TYWFASDTEG RHIILRFDFA TERFGRLSLL YQSGGYVDNV 

       250        260        270        280        290        300 
VETGVLSAVR EEKLALLYER FDELNDSSEM KIWVTNTKIV EAKDLSWSDF LVVDSSKFMV 

       310        320        330        340        350        360 
TRMTNVMSFL VDEEKKMVVV CDTDIDQHMN RFYIVGEDIY KEVYKDIAQG WFSYWPLLIS 

       370        380 
YAPSLVQIQQ GKVIPGGKRK R 

« Hide

References

« Hide 'large scale' references
[1]"Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.
DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.

Web resources

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB022219 Genomic DNA. Translation: BAB02046.1.
CP002686 Genomic DNA. Translation: AEE75969.1.
RefSeqNP_188384.1. NM_112637.1.
UniGeneAt.53357.

3D structure databases

ProteinModelPortalQ9LUP1.
SMRQ9LUP1. Positions 2-40.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ9LUP1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT3G17570.1; AT3G17570.1; AT3G17570.
GeneID821023.
KEGGath:AT3G17570.

Organism-specific databases

TAIRAT3G17570.

Phylogenomic databases

eggNOGNOG285994.
HOGENOMHOG000112505.
InParanoidQ9LUP1.
OMAYIVGEDI.
PhylomeDBQ9LUP1.
ProtClustDBCLSN2913487.

Gene expression databases

GenevestigatorQ9LUP1.

Family and domain databases

InterProIPR006527. F-box-assoc_dom_typ1.
IPR017451. F-box-assoc_interact_dom.
IPR001810. F-box_dom.
[Graphical view]
PfamPF00646. F-box. 1 hit.
PF07734. FBA_1. 1 hit.
[Graphical view]
SMARTSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMSSF81383. SSF81383. 2 hits.
TIGRFAMsTIGR01640. F_box_assoc_1. 1 hit.
PROSITEPS50181. FBOX. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameFBK61_ARATH
AccessionPrimary (citable) accession number: Q9LUP1
Entry history
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: October 1, 2000
Last modified: February 19, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names