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Q9LUP1

- FBK61_ARATH

UniProt

Q9LUP1 - FBK61_ARATH

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Protein

Putative F-box/kelch-repeat protein At3g17570

Gene

At3g17570

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative F-box/kelch-repeat protein At3g17570
Gene namesi
Ordered Locus Names:At3g17570
ORF Names:MKP6.12
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G17570.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 381381Putative F-box/kelch-repeat protein At3g17570PRO_0000283221Add
BLAST

Proteomic databases

PRIDEiQ9LUP1.

Expressioni

Gene expression databases

GenevestigatoriQ9LUP1.

Structurei

3D structure databases

ProteinModelPortaliQ9LUP1.
SMRiQ9LUP1. Positions 2-40.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 4545F-boxPROSITE-ProRule annotationAdd
BLAST
Repeati151 – 19949Kelch 1Add
BLAST
Repeati229 – 28153Kelch 2Add
BLAST
Repeati331 – 37949Kelch 3Add
BLAST

Sequence similaritiesi

Contains 1 F-box domain.PROSITE-ProRule annotation
Contains 3 Kelch repeats.Curated

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

eggNOGiNOG285994.
HOGENOMiHOG000112505.
InParanoidiQ9LUP1.
OMAiYIVGEDI.
PhylomeDBiQ9LUP1.

Family and domain databases

InterProiIPR006527. F-box-assoc_dom_typ1.
IPR017451. F-box-assoc_interact_dom.
IPR001810. F-box_dom.
[Graphical view]
PfamiPF00646. F-box. 1 hit.
PF07734. FBA_1. 1 hit.
[Graphical view]
SMARTiSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 2 hits.
TIGRFAMsiTIGR01640. F_box_assoc_1. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9LUP1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFTDLPRDLE TEILSRVPAT SLQKLKPTCK RWYTLFKDPE FLKKHVGRAE
60 70 80 90 100
REVISLMSLR VYSLSVNLSG IHSSVEMTGM LNSLKDSEDV KISDITECNG
110 120 130 140 150
LLLCTTDDSR LVVWNPYTGE TRWIPYKSNS PYEMYQKFVL GYDNTNKSRY
160 170 180 190 200
SYKILRCYHG LIDFGYEFEI YEFNSHSWRR FYDNSPNCSF ESKGVTLKGN
210 220 230 240 250
TYWFASDTEG RHIILRFDFA TERFGRLSLL YQSGGYVDNV VETGVLSAVR
260 270 280 290 300
EEKLALLYER FDELNDSSEM KIWVTNTKIV EAKDLSWSDF LVVDSSKFMV
310 320 330 340 350
TRMTNVMSFL VDEEKKMVVV CDTDIDQHMN RFYIVGEDIY KEVYKDIAQG
360 370 380
WFSYWPLLIS YAPSLVQIQQ GKVIPGGKRK R
Length:381
Mass (Da):44,467
Last modified:October 1, 2000 - v1
Checksum:i4AF917AB126474BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB022219 Genomic DNA. Translation: BAB02046.1.
CP002686 Genomic DNA. Translation: AEE75969.1.
RefSeqiNP_188384.1. NM_112637.1.
UniGeneiAt.53357.

Genome annotation databases

EnsemblPlantsiAT3G17570.1; AT3G17570.1; AT3G17570.
GeneIDi821023.
KEGGiath:AT3G17570.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB022219 Genomic DNA. Translation: BAB02046.1 .
CP002686 Genomic DNA. Translation: AEE75969.1 .
RefSeqi NP_188384.1. NM_112637.1.
UniGenei At.53357.

3D structure databases

ProteinModelPortali Q9LUP1.
SMRi Q9LUP1. Positions 2-40.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q9LUP1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G17570.1 ; AT3G17570.1 ; AT3G17570 .
GeneIDi 821023.
KEGGi ath:AT3G17570.

Organism-specific databases

TAIRi AT3G17570.

Phylogenomic databases

eggNOGi NOG285994.
HOGENOMi HOG000112505.
InParanoidi Q9LUP1.
OMAi YIVGEDI.
PhylomeDBi Q9LUP1.

Gene expression databases

Genevestigatori Q9LUP1.

Family and domain databases

InterProi IPR006527. F-box-assoc_dom_typ1.
IPR017451. F-box-assoc_interact_dom.
IPR001810. F-box_dom.
[Graphical view ]
Pfami PF00646. F-box. 1 hit.
PF07734. FBA_1. 1 hit.
[Graphical view ]
SMARTi SM00256. FBOX. 1 hit.
[Graphical view ]
SUPFAMi SSF81383. SSF81383. 2 hits.
TIGRFAMsi TIGR01640. F_box_assoc_1. 1 hit.
PROSITEi PS50181. FBOX. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
    Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.
    DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiFBK61_ARATH
AccessioniPrimary (citable) accession number: Q9LUP1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: October 1, 2000
Last modified: October 1, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3