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Q9LUP1

- FBK61_ARATH

UniProt

Q9LUP1 - FBK61_ARATH

Protein

Putative F-box/kelch-repeat protein At3g17570

Gene

At3g17570

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 1 (01 Oct 2000)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative F-box/kelch-repeat protein At3g17570
    Gene namesi
    Ordered Locus Names:At3g17570
    ORF Names:MKP6.12
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 3

    Organism-specific databases

    TAIRiAT3G17570.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 381381Putative F-box/kelch-repeat protein At3g17570PRO_0000283221Add
    BLAST

    Proteomic databases

    PRIDEiQ9LUP1.

    Expressioni

    Gene expression databases

    GenevestigatoriQ9LUP1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9LUP1.
    SMRiQ9LUP1. Positions 2-40.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini1 – 4545F-boxPROSITE-ProRule annotationAdd
    BLAST
    Repeati151 – 19949Kelch 1Add
    BLAST
    Repeati229 – 28153Kelch 2Add
    BLAST
    Repeati331 – 37949Kelch 3Add
    BLAST

    Sequence similaritiesi

    Contains 1 F-box domain.PROSITE-ProRule annotation
    Contains 3 Kelch repeats.Curated

    Keywords - Domaini

    Kelch repeat, Repeat

    Phylogenomic databases

    eggNOGiNOG285994.
    HOGENOMiHOG000112505.
    InParanoidiQ9LUP1.
    OMAiYIVGEDI.
    PhylomeDBiQ9LUP1.

    Family and domain databases

    InterProiIPR006527. F-box-assoc_dom_typ1.
    IPR017451. F-box-assoc_interact_dom.
    IPR001810. F-box_dom.
    [Graphical view]
    PfamiPF00646. F-box. 1 hit.
    PF07734. FBA_1. 1 hit.
    [Graphical view]
    SMARTiSM00256. FBOX. 1 hit.
    [Graphical view]
    SUPFAMiSSF81383. SSF81383. 2 hits.
    TIGRFAMsiTIGR01640. F_box_assoc_1. 1 hit.
    PROSITEiPS50181. FBOX. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9LUP1-1 [UniParc]FASTAAdd to Basket

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    MFTDLPRDLE TEILSRVPAT SLQKLKPTCK RWYTLFKDPE FLKKHVGRAE    50
    REVISLMSLR VYSLSVNLSG IHSSVEMTGM LNSLKDSEDV KISDITECNG 100
    LLLCTTDDSR LVVWNPYTGE TRWIPYKSNS PYEMYQKFVL GYDNTNKSRY 150
    SYKILRCYHG LIDFGYEFEI YEFNSHSWRR FYDNSPNCSF ESKGVTLKGN 200
    TYWFASDTEG RHIILRFDFA TERFGRLSLL YQSGGYVDNV VETGVLSAVR 250
    EEKLALLYER FDELNDSSEM KIWVTNTKIV EAKDLSWSDF LVVDSSKFMV 300
    TRMTNVMSFL VDEEKKMVVV CDTDIDQHMN RFYIVGEDIY KEVYKDIAQG 350
    WFSYWPLLIS YAPSLVQIQQ GKVIPGGKRK R 381
    Length:381
    Mass (Da):44,467
    Last modified:October 1, 2000 - v1
    Checksum:i4AF917AB126474BF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB022219 Genomic DNA. Translation: BAB02046.1.
    CP002686 Genomic DNA. Translation: AEE75969.1.
    RefSeqiNP_188384.1. NM_112637.1.
    UniGeneiAt.53357.

    Genome annotation databases

    EnsemblPlantsiAT3G17570.1; AT3G17570.1; AT3G17570.
    GeneIDi821023.
    KEGGiath:AT3G17570.

    Cross-referencesi

    Web resourcesi

    PlantsUBQ

    A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB022219 Genomic DNA. Translation: BAB02046.1 .
    CP002686 Genomic DNA. Translation: AEE75969.1 .
    RefSeqi NP_188384.1. NM_112637.1.
    UniGenei At.53357.

    3D structure databases

    ProteinModelPortali Q9LUP1.
    SMRi Q9LUP1. Positions 2-40.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q9LUP1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT3G17570.1 ; AT3G17570.1 ; AT3G17570 .
    GeneIDi 821023.
    KEGGi ath:AT3G17570.

    Organism-specific databases

    TAIRi AT3G17570.

    Phylogenomic databases

    eggNOGi NOG285994.
    HOGENOMi HOG000112505.
    InParanoidi Q9LUP1.
    OMAi YIVGEDI.
    PhylomeDBi Q9LUP1.

    Gene expression databases

    Genevestigatori Q9LUP1.

    Family and domain databases

    InterProi IPR006527. F-box-assoc_dom_typ1.
    IPR017451. F-box-assoc_interact_dom.
    IPR001810. F-box_dom.
    [Graphical view ]
    Pfami PF00646. F-box. 1 hit.
    PF07734. FBA_1. 1 hit.
    [Graphical view ]
    SMARTi SM00256. FBOX. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81383. SSF81383. 2 hits.
    TIGRFAMsi TIGR01640. F_box_assoc_1. 1 hit.
    PROSITEi PS50181. FBOX. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
      Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.
      DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.

    Entry informationi

    Entry nameiFBK61_ARATH
    AccessioniPrimary (citable) accession number: Q9LUP1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 3, 2007
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 65 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3