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Protein

Putative sugar transporter ERD6-like 13

Gene

At3g20460

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Sugar transporter.Curated

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Sugar transport, Transport

Enzyme and pathway databases

ReactomeiR-ATH-428790. Facilitative Na+-independent glucose transporters.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative sugar transporter ERD6-like 13
Gene namesi
Ordered Locus Names:At3g20460
ORF Names:MQC12.5
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G20460.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei51 – 7121Helical; Name=1Sequence analysisAdd
BLAST
Transmembranei89 – 10921Helical; Name=2Sequence analysisAdd
BLAST
Transmembranei116 – 13823Helical; Name=3Sequence analysisAdd
BLAST
Transmembranei151 – 17121Helical; Name=4Sequence analysisAdd
BLAST
Transmembranei182 – 20221Helical; Name=5Sequence analysisAdd
BLAST
Transmembranei207 – 22721Helical; Name=6Sequence analysisAdd
BLAST
Transmembranei291 – 31121Helical; Name=7Sequence analysisAdd
BLAST
Transmembranei324 – 34421Helical; Name=8Sequence analysisAdd
BLAST
Transmembranei353 – 37321Helical; Name=9Sequence analysisAdd
BLAST
Transmembranei390 – 41021Helical; Name=10Sequence analysisAdd
BLAST
Transmembranei423 – 44523Helical; Name=11Sequence analysisAdd
BLAST
Transmembranei451 – 47121Helical; Name=12Sequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 488487Putative sugar transporter ERD6-like 13PRO_0000259863Add
BLAST

Proteomic databases

PaxDbiQ9LTP6.
PRIDEiQ9LTP6.

Expressioni

Gene expression databases

GenevisibleiQ9LTP6. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G20460.1.

Structurei

3D structure databases

ProteinModelPortaliQ9LTP6.
SMRiQ9LTP6. Positions 44-482.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0254. Eukaryota.
ENOG410XNQK. LUCA.
HOGENOMiHOG000202868.
InParanoidiQ9LTP6.
OMAiGSVISWQ.
PhylomeDBiQ9LTP6.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
IPR005829. Sugar_transporter_CS.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00879. SP. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
PS00216. SUGAR_TRANSPORT_1. 2 hits.
PS00217. SUGAR_TRANSPORT_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9LTP6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDEPLLQKV KIQEDIESVP LLQKVKIQED IESVKGIRVN NDGEEDGPVT
60 70 80 90 100
LILLFTTFTA LCGTFSYGTA AGFTSPAQTG IMAGLNLSLA EFSFFGAVLT
110 120 130 140 150
IGGLVGAAMS GKLADVFGRR GALGVSNSFC MAGWLMIAFS QATWSLDIGR
160 170 180 190 200
LFLGVAAGVA SYVVPVYIVE IAPKKVRGTF SAINSLVMCA SVAVTYLLGS
210 220 230 240 250
VISWQKLALI STVPCVFEFV GLFFIPESPR WLSRNGRVKE SEVSLQRLRG
260 270 280 290 300
NNTDITKEAA EIKKYMDNLQ EFKEDGFFDL FNPRYSRVVT VGIGLLVLQQ
310 320 330 340 350
LGGLSGYTFY LSSIFKKSGF PNNVGVMMAS VVQSVTSVLG IVIVDKYGRR
360 370 380 390 400
SLLTVATIMM CLGSLITGLS FLFQSYGLLE HYTPISTFMG VLVFLTSITI
410 420 430 440 450
GIGGIPWVMI SEMTPINIKG SAGTLCNLTS WSSNWFVSYT FNFLFQWSSS
460 470 480
GVFFIYTMIS GVGILFVMKM VPETRGRSLE EIQAAITR
Length:488
Mass (Da):53,051
Last modified:November 28, 2006 - v2
Checksum:iA2930DC26BDA7C05
GO

Sequence cautioni

The sequence BAB02829.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB024036 Genomic DNA. Translation: BAB02829.1. Sequence problems.
CP002686 Genomic DNA. Translation: AEE76382.1.
RefSeqiNP_188681.1. NM_112937.1.
UniGeneiAt.53402.

Genome annotation databases

EnsemblPlantsiAT3G20460.1; AT3G20460.1; AT3G20460.
GeneIDi821591.
GrameneiAT3G20460.1; AT3G20460.1; AT3G20460.
KEGGiath:AT3G20460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB024036 Genomic DNA. Translation: BAB02829.1. Sequence problems.
CP002686 Genomic DNA. Translation: AEE76382.1.
RefSeqiNP_188681.1. NM_112937.1.
UniGeneiAt.53402.

3D structure databases

ProteinModelPortaliQ9LTP6.
SMRiQ9LTP6. Positions 44-482.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT3G20460.1.

Proteomic databases

PaxDbiQ9LTP6.
PRIDEiQ9LTP6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G20460.1; AT3G20460.1; AT3G20460.
GeneIDi821591.
GrameneiAT3G20460.1; AT3G20460.1; AT3G20460.
KEGGiath:AT3G20460.

Organism-specific databases

TAIRiAT3G20460.

Phylogenomic databases

eggNOGiKOG0254. Eukaryota.
ENOG410XNQK. LUCA.
HOGENOMiHOG000202868.
InParanoidiQ9LTP6.
OMAiGSVISWQ.
PhylomeDBiQ9LTP6.

Enzyme and pathway databases

ReactomeiR-ATH-428790. Facilitative Na+-independent glucose transporters.

Miscellaneous databases

PROiQ9LTP6.

Gene expression databases

GenevisibleiQ9LTP6. AT.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
IPR005829. Sugar_transporter_CS.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00879. SP. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
PS00216. SUGAR_TRANSPORT_1. 2 hits.
PS00217. SUGAR_TRANSPORT_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
    Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.
    DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "The monosaccharide transporter gene family in land plants is ancient and shows differential subfamily expression and expansion across lineages."
    Johnson D.A., Hill J.P., Thomas M.A.
    BMC Evol. Biol. 6:64-64(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY.

Entry informationi

Entry nameiEDL13_ARATH
AccessioniPrimary (citable) accession number: Q9LTP6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 28, 2006
Last modified: July 6, 2016
This is version 98 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.