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Protein
Submitted name:

AT3g17020/K14A17_14

Gene

At3g17020

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: UniProtKB-KW

GO - Biological processi

  1. response to cold Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
AT3g17020/K14A17_14Imported
Submitted name:
Adenine nucleotide alpha hydrolases-like superfamily proteinImported
Submitted name:
Genomic DNA, chromosome 3, TAC clone:K14A17Imported
Gene namesi
Ordered Locus Names:At3g17020Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G17020.

Subcellular locationi

GO - Cellular componenti

  1. plasma membrane Source: TAIR
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ9LSP5.
PRIDEiQ9LSP5.

Expressioni

Gene expression databases

GenevestigatoriQ9LSP5.

Interactioni

Protein-protein interaction databases

IntActiQ9LSP5. 2 interactions.
STRINGi3702.AT3G17020.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9LSP5.
SMRiQ9LSP5. Positions 5-161.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG302561.
HOGENOMiHOG000238898.
InParanoidiQ9LSP5.
OMAiCQAINEI.
PhylomeDBiQ9LSP5.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR014729. Rossmann-like_a/b/a_fold.
IPR006015. Universal_stress_UspA.
IPR006016. UspA.
[Graphical view]
PfamiPF00582. Usp. 1 hit.
[Graphical view]
PRINTSiPR01438. UNVRSLSTRESS.

Sequencei

Sequence statusi: Complete.

Q9LSP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAESGGRRIG VAVDFSDCSK KALSWAIDNV VRDGDHLILI TIAHDMNYEE
60 70 80 90 100
GEMQLWETVG SPFIPMSEFS DAAVMKKYAL KPDAETLDIV NTAARKKTIT
110 120 130 140 150
VVMKIYWGDP REKICAAAEQ IPLSSLVMGN RGLGGLKRMI MGSVSNHVVN
160
NVACPVTVVK AHI
Length:163
Mass (Da):17,776
Last modified:October 1, 2000 - v1
Checksum:i7E544B3C5B905C73
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF378888 mRNA. Translation: AAK55691.1.
AY050480 mRNA. Translation: AAK91493.1.
CP002686 Genomic DNA. Translation: AEE75895.1.
AB026636 Genomic DNA. Translation: BAA94980.1.
RefSeqiNP_566564.1. NM_112578.4.
UniGeneiAt.24032.

Genome annotation databases

EnsemblPlantsiAT3G17020.1; AT3G17020.1; AT3G17020.
GeneIDi820958.
KEGGiath:AT3G17020.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF378888 mRNA. Translation: AAK55691.1.
AY050480 mRNA. Translation: AAK91493.1.
CP002686 Genomic DNA. Translation: AEE75895.1.
AB026636 Genomic DNA. Translation: BAA94980.1.
RefSeqiNP_566564.1. NM_112578.4.
UniGeneiAt.24032.

3D structure databases

ProteinModelPortaliQ9LSP5.
SMRiQ9LSP5. Positions 5-161.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9LSP5. 2 interactions.
STRINGi3702.AT3G17020.1-P.

Proteomic databases

PaxDbiQ9LSP5.
PRIDEiQ9LSP5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G17020.1; AT3G17020.1; AT3G17020.
GeneIDi820958.
KEGGiath:AT3G17020.

Organism-specific databases

TAIRiAT3G17020.

Phylogenomic databases

eggNOGiNOG302561.
HOGENOMiHOG000238898.
InParanoidiQ9LSP5.
OMAiCQAINEI.
PhylomeDBiQ9LSP5.

Gene expression databases

GenevestigatoriQ9LSP5.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR014729. Rossmann-like_a/b/a_fold.
IPR006015. Universal_stress_UspA.
IPR006016. UspA.
[Graphical view]
PfamiPF00582. Usp. 1 hit.
[Graphical view]
PRINTSiPR01438. UNVRSLSTRESS.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
    Nakamura Y.
    DNA Res. 7:131-135(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Blocker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schafer M., Muller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Lohnert T.H., Nordsiek G., Reichelt J., Scharfe M., Schon O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwalder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.P., Cottet A., Casacuberta E., Monfort A., Argiriou A., flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
  4. Cited for: NUCLEOTIDE SEQUENCE.
  5. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. The Arabidopsis Information Resource (TAIR)
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ9LSP5_ARATH
AccessioniPrimary (citable) accession number: Q9LSP5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: April 1, 2015
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.