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Protein

60S ribosomal protein L30-3

Gene

RPL30C

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

  • response to fungus Source: TAIR
  • translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-ATH-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-ATH-72689. Formation of a pool of free 40S subunits.
R-ATH-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-ATH-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-ATH-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L30-3
Gene namesi
Name:RPL30C
Ordered Locus Names:At3g18740
ORF Names:MVE11.10
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G18740.

Subcellular locationi

GO - Cellular componenti

  • cytosolic large ribosomal subunit Source: TAIR
  • cytosolic ribosome Source: TAIR
  • plasma membrane Source: TAIR
  • plasmodesma Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001461311 – 11260S ribosomal protein L30-3Add BLAST112

Proteomic databases

PaxDbiQ9LSA3.
PRIDEiQ9LSA3.

Expressioni

Gene expression databases

GenevisibleiQ9LSA3. AT.

Interactioni

Protein-protein interaction databases

BioGridi6738. 2 interactors.
STRINGi3702.AT3G18740.1.

Structurei

3D structure databases

ProteinModelPortaliQ9LSA3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30e family.Curated

Phylogenomic databases

eggNOGiKOG2988. Eukaryota.
COG1911. LUCA.
HOGENOMiHOG000055224.
KOiK02908.
OMAiNIPVYQH.
OrthoDBiEOG09360TU0.
PhylomeDBiQ9LSA3.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00481. Ribosomal_L30e. 1 hit.
InterProiIPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PANTHERiPTHR11449. PTHR11449. 1 hit.
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiPS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9LSA3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAEKKAKKS HEGINSRLAL VMKSGKYTLG YKSVLKSLRS SKGKLILISS
60 70 80 90 100
NCPPLRRSEI EYYAMLAKVG VHRYNGNNVD LGTACGKYFR VSCLSIVDPG
110
DSDIIKTLPG DQ
Length:112
Mass (Da):12,279
Last modified:October 1, 2000 - v1
Checksum:iB1B2286ED2CC0549
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB026654 Genomic DNA. Translation: BAB01800.1.
CP002686 Genomic DNA. Translation: AEE76138.1.
AF446880 mRNA. Translation: AAL38613.1.
AY052710 mRNA. Translation: AAK96614.1.
AY088285 mRNA. Translation: AAM65824.1.
RefSeqiNP_188504.1. NM_112760.4.
UniGeneiAt.26483.

Genome annotation databases

EnsemblPlantsiAT3G18740.1; AT3G18740.1; AT3G18740.
GeneIDi821405.
GrameneiAT3G18740.1; AT3G18740.1; AT3G18740.
KEGGiath:AT3G18740.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB026654 Genomic DNA. Translation: BAB01800.1.
CP002686 Genomic DNA. Translation: AEE76138.1.
AF446880 mRNA. Translation: AAL38613.1.
AY052710 mRNA. Translation: AAK96614.1.
AY088285 mRNA. Translation: AAM65824.1.
RefSeqiNP_188504.1. NM_112760.4.
UniGeneiAt.26483.

3D structure databases

ProteinModelPortaliQ9LSA3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi6738. 2 interactors.
STRINGi3702.AT3G18740.1.

Proteomic databases

PaxDbiQ9LSA3.
PRIDEiQ9LSA3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G18740.1; AT3G18740.1; AT3G18740.
GeneIDi821405.
GrameneiAT3G18740.1; AT3G18740.1; AT3G18740.
KEGGiath:AT3G18740.

Organism-specific databases

TAIRiAT3G18740.

Phylogenomic databases

eggNOGiKOG2988. Eukaryota.
COG1911. LUCA.
HOGENOMiHOG000055224.
KOiK02908.
OMAiNIPVYQH.
OrthoDBiEOG09360TU0.
PhylomeDBiQ9LSA3.

Enzyme and pathway databases

ReactomeiR-ATH-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-ATH-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-ATH-72689. Formation of a pool of free 40S subunits.
R-ATH-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-ATH-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-ATH-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiQ9LSA3.

Gene expression databases

GenevisibleiQ9LSA3. AT.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
HAMAPiMF_00481. Ribosomal_L30e. 1 hit.
InterProiIPR029064. L30e-like.
IPR000231. Ribosomal_L30e.
IPR022991. Ribosomal_L30e_CS.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PANTHERiPTHR11449. PTHR11449. 1 hit.
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiPS00709. RIBOSOMAL_L30E_1. 1 hit.
PS00993. RIBOSOMAL_L30E_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL303_ARATH
AccessioniPrimary (citable) accession number: Q9LSA3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 16, 2001
Last sequence update: October 1, 2000
Last modified: November 30, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.