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Unreviewed, UniProtKB/TrEMBL Q9LS24 (Q9LS24_ARATH)

Last modified May 26, 2009. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein At5g46590 EMBL BAH30616.1
Submitted name:
    At5g46590 EMBL AAW70401.1
    NAM-like EMBL BAA97530.1
Gene names
Ordered Locus Names: At5g46590 TAIR At5g46590
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length292 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processregulation of transcription

Inferred from electronic annotation. Source: InterPro

   Molecular functionDNA binding

Inferred from electronic annotation. Source: InterPro

protein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9LS24-1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: B751FDCEC6F5C3E5

FASTA29233,580
        10         20         30         40         50         60 
MGSSCLPPGF RFHPTDEELI EYYLKRKVEG LEIELEVIPV IDLYSFDPWE LPDKSFLPNR 

        70         80         90        100        110        120 
DMEWYFFCSR DKKYPNGFRT NRGTKAGYWK ATGKDRKITS RSSSIIGYRK TLVFYKGRAP 

       130        140        150        160        170        180 
LGDRSNWIMH EYRLCDDDTS QGSQNLKGAF VLCRVAMKNE IKTNTKIRKI PSEQTIGSGE 

       190        200        210        220        230        240 
SSGLSSRVTS PSRDETMPFH SFANPVSTET DSSNIWISPE FILDSSKDYP QIQDVASQCF 

       250        260        270        280        290 
QQDFDFPIIG NQNMEFPAST SLDQNMDEFM QNGYWTNYGY DQTGLFGYSD FS 

« Hide

References

[1]"Structural analysis of Arabidopsis thaliana chromosome 5. XI."
Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H., Tabata S.
Submitted (JUN-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"ORF Cloning and Analysis of Arabidopsis Transcription Factor Genes."
Fujita M.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis ORF clones."
Kim C.J., Chen H., Cheuk R., Shinn P., Ecker J.R.
Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis ORF clones."
Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

BT020305 mRNA. Translation: AAV85660.1.
BT020555 mRNA. Translation: AAW70401.1.
AB028605 Genomic DNA. Translation: BAA97530.1.
AB493778 mRNA. Translation: BAH30616.1.
IPIIPI00524352.
RefSeqNP_199471.1.
UniGeneAt.51256

3D structure databases

HSSPHSSP built from PDB template 1UT4 based on UniProtKB Q9C932.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9LS24. 1 interaction.

Genome annotation databases

GeneID834702.
GenomeReviewsGene locus AT5G46590 in contig BA000015_GR.
KEGGath:AT5G46590.
NMPDRfig|3702.1.peg.26452.

Organism-specific databases

TAIRAt5g46590.

Phylogenomic databases

OMAQ9LS24. VISSATN.

Family and domain databases

InterProIPR003441. NAM.
[Graphical view]
PfamPF02365. NAM. 1 hit.
[Graphical view]
PROSITEPS51005. NAC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9LS24_ARATH
AccessionPrimary (citable) accession number: Q9LS24
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 26, 2009
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information