Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot Q9LRZ5 (PLDP1_ARATH)

Last modified November 3, 2009. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Hide | Top

Names and origin

Protein namesRecommended name:
    Phospholipase D p1
      Short name=AtPLDp1
    EC=3.1.4.4
Alternative name(s):
    Phospholipase D1 PHOX and PX-containing domain protein
    Phospholipase D zeta 1
      Short name=PLDzeta1
Gene names
Name: PLDP1
Ordered Locus Names: At3g16785, At3g16790
ORF Names: K20I9_1, MGL6.26
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Hide | Top

Protein attributes

Sequence length1096 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Hide | Top

General annotation (Comments)

Function

Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. Phosphatidylcholine-selective.

Catalytic activity

A phosphatidylcholine + H2O = choline + a phosphatidate.

Enzyme regulation

Calcium-independent and PIP2-dependent.

Sequence similarities

Belongs to the phospholipase D family. PXPH-PLD subfamily.

Contains 1 PH domain.

Contains 2 PLD phosphodiesterase domains.

Contains 1 PX (phox homology) domain.

Hide | Top

Ontologies

Keywords
   Biological processLipid degradation
   DomainRepeat
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processlipid catabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

root development

Inferred from genetic interaction. Source: TAIR

   Molecular functionNAPE-specific phospholipase D activity

Inferred from electronic annotation. Source: EC

phospholipase D activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Hide | Top

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 10961096Phospholipase D p1
PRO_0000218818

Regions

Domain50 – 204155PX
Domain234 – 342109PH
Domain477 – 50428PLD phosphodiesterase 1
Domain892 – 91928PLD phosphodiesterase 2

Sites

Active site4821 Potential
Active site4841 Potential
Active site4891 Potential
Active site8971 Potential
Active site8991 Potential
Active site9041 Potential

Hide | Top

Sequences

Sequence LengthMass (Da)Tools
Q9LRZ5-1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 8B71D9D0DDEAEA45

FASTA1,096124,505
        10         20         30         40         50         60 
MASEQLMSPA SGGGRYFQMQ PEQFPSMVSS LFSFAPAPTQ ETNRIFEELP KAVIVSVSRP 

        70         80         90        100        110        120 
DAGDISPVLL SYTIECQYKQ FKWQLVKKAS QVFYLHFALK KRAFIEEIHE KQEQVKEWLQ 

       130        140        150        160        170        180 
NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE 

       190        200        210        220        230        240 
YLNHFLGNLD IVNSREVCRF LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC 

       250        260        270        280        290        300 
GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE 

       310        320        330        340        350        360 
LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP 

       370        380        390        400        410        420 
RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW VCPELYLRRP FDPHTSSRLD 

       430        440        450        460        470        480 
NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS 

       490        500        510        520        530        540 
HHEKLVIVDN QVCFIGGLDL CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL 

       550        560        570        580        590        600 
KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM 

       610        620        630        640        650        660 
VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK 

       670        680        690        700        710        720 
ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP VAKRGSNAID SEWWETQDHD 

       730        740        750        760        770        780 
YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ 

       790        800        810        820        830        840 
FFISGLSGDD TVKNRVLEAL YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA 

       850        860        870        880        890        900 
IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI 

       910        920        930        940        950        960 
MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL 

       970        980        990       1000       1010       1020 
WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ DVFSCVPNDL IHSRMAFRQS 

      1030       1040       1050       1060       1070       1080 
LSYWKEKLGH TTIDLGIAPE KLESYHNGDI KRSDPMDRLK AIKGHLVSFP LDFMCKEDLR 

      1090 
PVFNESEYYA SPQVFH

« Hide

Hide | Top

References

« Hide 'large scale' references
[1]"Arabidopsis phospholipase D zeta1."
Qin C., Wang X.
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]"Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.
DNA Res. 7:131-135(2000) [PubMed: 10819329] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
+Additional computationally mapped references.

Hide | Top

Cross-references

Sequence databases

AF411833 mRNA. Translation: AAL06337.1.
AB028608, AB022217 Genomic DNA. Translation: BAA95772.2.
IPIIPI00534735.
RefSeqNP_188302.2.
UniGeneAt.21958

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEQ9LRZ5.

Genome annotation databases

GeneID820932.
GenomeReviewsGene locus AT3G16785 in contig BA000014_GR.
KEGGath:AT3G16785.
NMPDRfig|3702.1.peg.13859.

Organism-specific databases

TAIRAt3g16785.

Phylogenomic databases

OMAMATAKTN.

Enzyme and pathway databases

BRENDA3.1.4.4. 302.

Gene expression databases

GenevestigatorQ9LRZ5.

Family and domain databases

InterProIPR011993. PH_type.
IPR015679. Phospholipase_D.
IPR001849. Pleckstrin_homology.
IPR001736. PLipase_D/transphosphatidylase.
IPR016555. PLipase_D_euk.
[Graphical view]
Gene3DG3DSA:2.30.29.30. PH_type. 1 hit.
PANTHERPTHR18896. Phospholipase_D. 1 hit.
PfamPF00169. PH. 1 hit.
PF00614. PLDc. 2 hits.
[Graphical view]
PIRSFPIRSF009376. Phospholipase_D_euk. 1 hit.
SMARTSM00233. PH. 1 hit.
SM00155. PLDc. 2 hits.
[Graphical view]
PROSITEPS50003. PH_DOMAIN. 1 hit.
PS50035. PLD. 2 hits.
PS50195. PX. False negative.
[Graphical view]
ProtoNetSearch...

Hide | Top

Entry information

Entry namePLDP1_ARATH
AccessionPrimary (citable) accession number: Q9LRZ5
Entry history
Integrated into UniProtKB/Swiss-Prot: April 3, 2002
Last sequence update: October 1, 2000
Last modified: November 3, 2009
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Hide | Top

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents