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Q9LRA7

- TPS9_ARATH

UniProt

Q9LRA7 - TPS9_ARATH

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Protein
Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
Gene
TPS9, At1g23870, T23E23.3
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate.

GO - Molecular functioni

  1. transferase activity, transferring glycosyl groups Source: UniProtKB-KW

GO - Biological processi

  1. trehalose biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT20. Glycosyltransferase Family 20.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 (EC:2.4.1.15)
Alternative name(s):
Trehalose-6-phosphate synthase 9
Short name:
AtTPS9
Gene namesi
Name:TPS9
Ordered Locus Names:At1g23870
ORF Names:T23E23.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G23870.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 867867Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
PRO_0000324830Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei5 – 51Phosphoserine By similarity
Modified residuei32 – 321Phosphothreonine By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ9LRA7.
PRIDEiQ9LRA7.

Expressioni

Gene expression databases

GenevestigatoriQ9LRA7.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G23870.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9LRA7.
SMRiQ9LRA7. Positions 137-546.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni59 – 546488Glycosyltransferase
Add
BLAST

Sequence similaritiesi

In the N-terminal section; belongs to the glycosyltransferase 20 family.
In the C-terminal section; belongs to the trehalose phosphatase family.

Phylogenomic databases

eggNOGiCOG0380.
HOGENOMiHOG000191476.
InParanoidiQ9LRA7.
KOiK16055.
OMAiDRGHLAN.
PhylomeDBiQ9LRA7.

Family and domain databases

Gene3Di3.40.50.1000. 2 hits.
InterProiIPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR006379. HAD-SF_hydro_IIB.
IPR003337. Trehalose_PPase.
[Graphical view]
PfamiPF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 1 hit.
TIGRFAMsiTIGR01484. HAD-SF-IIB. 1 hit.
TIGR00685. T6PP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LRA7-1 [UniParc]FASTAAdd to Basket

« Hide

MVSRSCANFL DLASWDLLDF PQTQRALPRV MTVPGIISEL DGGYSDGSSD    50
VNSSNSSRER KIIVANMLPL QAKRDTETGQ WCFSWDEDSL LLQLRDGFSS 100
DTEFVYIGSL NADIGISEQE EVSHKLLLDF NCVPTFLPKE MQEKFYLGFC 150
KHHLWPLFHY MLPMFPDHGD RFDRRLWQAY VSANKIFSDR VMEVINPEED 200
YVWIHDYHLM VLPTFLRKRF NRIKLGFFLH SPFPSSEIYR TLPVRDDLLR 250
GLLNCDLIGF HTFDYARHFL SCCSRMLGLD YESKRGHIGL DYFGRTVFIK 300
ILPVGIHMGR LESVLNLPST AAKMKEIQEQ FKGKKLILGV DDMDIFKGIS 350
LKLIAMERLF ETYWHMRGKL VLIQIVNPAR ATGKDVEEAK KETYSTAKRI 400
NERYGSAGYQ PVILIDRLVP RYEKTAYYAM ADCCLVNAVR DGMNLVPYKY 450
IICRQGTPGM DKAMGISHDS ARTSMLVVSE FIGCSPSLSG AIRVNPWDVD 500
AVAEAVNLAL TMGETEKRLR HEKHYHYVST HDVGYWAKSF MQDLERACRE 550
HYNKRCWGIG FGLSFRVLSL SPSFRKLSID HIVSTYRNTQ RRAIFLDYDG 600
TLVPESSIIK TPNAEVLSVL KSLCGDPKNT VFVVSGRGWE SLSDWLSPCE 650
NLGIAAEHGY FIRWSSKKEW ETCYSSAEAE WKTMVEPVMR SYMDATDGST 700
IEYKESALVW HHQDADPDFG ACQAKELLDH LESVLANEPV VVKRGQHIVE 750
VKPQGVSKGL AVEKVIHQMV EDGNPPDMVM CIGDDRSDED MFESILSTVT 800
NPDLPMPPEI FACTVGRKPS KAKYFLDDVS DVLKLLGGLA AATSSSKPEY 850
QQQSSSLHTQ VAFESII 867
Length:867
Mass (Da):98,496
Last modified:October 1, 2000 - v1
Checksum:i606736BC2B78FE81
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC002423 Genomic DNA. Translation: AAF87136.1.
CP002684 Genomic DNA. Translation: AEE30444.1.
AY072210 mRNA. Translation: AAL60031.1.
AY096366 mRNA. Translation: AAM20007.1.
RefSeqiNP_173799.1. NM_102235.2.
UniGeneiAt.41515.
At.48224.

Genome annotation databases

EnsemblPlantsiAT1G23870.1; AT1G23870.1; AT1G23870.
GeneIDi838998.
KEGGiath:AT1G23870.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC002423 Genomic DNA. Translation: AAF87136.1 .
CP002684 Genomic DNA. Translation: AEE30444.1 .
AY072210 mRNA. Translation: AAL60031.1 .
AY096366 mRNA. Translation: AAM20007.1 .
RefSeqi NP_173799.1. NM_102235.2.
UniGenei At.41515.
At.48224.

3D structure databases

ProteinModelPortali Q9LRA7.
SMRi Q9LRA7. Positions 137-546.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G23870.1-P.

Protein family/group databases

CAZyi GT20. Glycosyltransferase Family 20.

Proteomic databases

PaxDbi Q9LRA7.
PRIDEi Q9LRA7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G23870.1 ; AT1G23870.1 ; AT1G23870 .
GeneIDi 838998.
KEGGi ath:AT1G23870.

Organism-specific databases

TAIRi AT1G23870.

Phylogenomic databases

eggNOGi COG0380.
HOGENOMi HOG000191476.
InParanoidi Q9LRA7.
KOi K16055.
OMAi DRGHLAN.
PhylomeDBi Q9LRA7.

Gene expression databases

Genevestigatori Q9LRA7.

Family and domain databases

Gene3Di 3.40.50.1000. 2 hits.
InterProi IPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR006379. HAD-SF_hydro_IIB.
IPR003337. Trehalose_PPase.
[Graphical view ]
Pfami PF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view ]
SUPFAMi SSF56784. SSF56784. 1 hit.
TIGRFAMsi TIGR01484. HAD-SF-IIB. 1 hit.
TIGR00685. T6PP. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana."
    Leyman B., Van Dijck P., Thevelein J.M.
    Trends Plant Sci. 6:510-513(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiTPS9_ARATH
AccessioniPrimary (citable) accession number: Q9LRA7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: October 1, 2000
Last modified: June 11, 2014
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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