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Q9LRA7

- TPS9_ARATH

UniProt

Q9LRA7 - TPS9_ARATH

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Protein

Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

Gene

TPS9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate.

GO - Molecular functioni

  1. transferase activity, transferring glycosyl groups Source: UniProtKB-KW

GO - Biological processi

  1. trehalose biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT20. Glycosyltransferase Family 20.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 (EC:2.4.1.15)
Alternative name(s):
Trehalose-6-phosphate synthase 9
Short name:
AtTPS9
Gene namesi
Name:TPS9
Ordered Locus Names:At1g23870
ORF Names:T23E23.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G23870.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 867867Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9PRO_0000324830Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei5 – 51PhosphoserineBy similarity
Modified residuei32 – 321PhosphothreonineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ9LRA7.
PRIDEiQ9LRA7.

Expressioni

Gene expression databases

GenevestigatoriQ9LRA7.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G23870.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9LRA7.
SMRiQ9LRA7. Positions 137-546.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni59 – 546488GlycosyltransferaseAdd
BLAST

Sequence similaritiesi

In the N-terminal section; belongs to the glycosyltransferase 20 family.Curated
In the C-terminal section; belongs to the trehalose phosphatase family.Curated

Phylogenomic databases

eggNOGiCOG0380.
HOGENOMiHOG000191476.
InParanoidiQ9LRA7.
KOiK16055.
OMAiDRGHLAN.
PhylomeDBiQ9LRA7.

Family and domain databases

Gene3Di3.40.50.1000. 2 hits.
InterProiIPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR006379. HAD-SF_hydro_IIB.
IPR003337. Trehalose_PPase.
[Graphical view]
PfamiPF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 1 hit.
TIGRFAMsiTIGR01484. HAD-SF-IIB. 1 hit.
TIGR00685. T6PP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LRA7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVSRSCANFL DLASWDLLDF PQTQRALPRV MTVPGIISEL DGGYSDGSSD
60 70 80 90 100
VNSSNSSRER KIIVANMLPL QAKRDTETGQ WCFSWDEDSL LLQLRDGFSS
110 120 130 140 150
DTEFVYIGSL NADIGISEQE EVSHKLLLDF NCVPTFLPKE MQEKFYLGFC
160 170 180 190 200
KHHLWPLFHY MLPMFPDHGD RFDRRLWQAY VSANKIFSDR VMEVINPEED
210 220 230 240 250
YVWIHDYHLM VLPTFLRKRF NRIKLGFFLH SPFPSSEIYR TLPVRDDLLR
260 270 280 290 300
GLLNCDLIGF HTFDYARHFL SCCSRMLGLD YESKRGHIGL DYFGRTVFIK
310 320 330 340 350
ILPVGIHMGR LESVLNLPST AAKMKEIQEQ FKGKKLILGV DDMDIFKGIS
360 370 380 390 400
LKLIAMERLF ETYWHMRGKL VLIQIVNPAR ATGKDVEEAK KETYSTAKRI
410 420 430 440 450
NERYGSAGYQ PVILIDRLVP RYEKTAYYAM ADCCLVNAVR DGMNLVPYKY
460 470 480 490 500
IICRQGTPGM DKAMGISHDS ARTSMLVVSE FIGCSPSLSG AIRVNPWDVD
510 520 530 540 550
AVAEAVNLAL TMGETEKRLR HEKHYHYVST HDVGYWAKSF MQDLERACRE
560 570 580 590 600
HYNKRCWGIG FGLSFRVLSL SPSFRKLSID HIVSTYRNTQ RRAIFLDYDG
610 620 630 640 650
TLVPESSIIK TPNAEVLSVL KSLCGDPKNT VFVVSGRGWE SLSDWLSPCE
660 670 680 690 700
NLGIAAEHGY FIRWSSKKEW ETCYSSAEAE WKTMVEPVMR SYMDATDGST
710 720 730 740 750
IEYKESALVW HHQDADPDFG ACQAKELLDH LESVLANEPV VVKRGQHIVE
760 770 780 790 800
VKPQGVSKGL AVEKVIHQMV EDGNPPDMVM CIGDDRSDED MFESILSTVT
810 820 830 840 850
NPDLPMPPEI FACTVGRKPS KAKYFLDDVS DVLKLLGGLA AATSSSKPEY
860
QQQSSSLHTQ VAFESII
Length:867
Mass (Da):98,496
Last modified:October 1, 2000 - v1
Checksum:i606736BC2B78FE81
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002423 Genomic DNA. Translation: AAF87136.1.
CP002684 Genomic DNA. Translation: AEE30444.1.
AY072210 mRNA. Translation: AAL60031.1.
AY096366 mRNA. Translation: AAM20007.1.
RefSeqiNP_173799.1. NM_102235.2.
UniGeneiAt.41515.
At.48224.

Genome annotation databases

EnsemblPlantsiAT1G23870.1; AT1G23870.1; AT1G23870.
GeneIDi838998.
KEGGiath:AT1G23870.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002423 Genomic DNA. Translation: AAF87136.1 .
CP002684 Genomic DNA. Translation: AEE30444.1 .
AY072210 mRNA. Translation: AAL60031.1 .
AY096366 mRNA. Translation: AAM20007.1 .
RefSeqi NP_173799.1. NM_102235.2.
UniGenei At.41515.
At.48224.

3D structure databases

ProteinModelPortali Q9LRA7.
SMRi Q9LRA7. Positions 137-546.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G23870.1-P.

Protein family/group databases

CAZyi GT20. Glycosyltransferase Family 20.

Proteomic databases

PaxDbi Q9LRA7.
PRIDEi Q9LRA7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G23870.1 ; AT1G23870.1 ; AT1G23870 .
GeneIDi 838998.
KEGGi ath:AT1G23870.

Organism-specific databases

TAIRi AT1G23870.

Phylogenomic databases

eggNOGi COG0380.
HOGENOMi HOG000191476.
InParanoidi Q9LRA7.
KOi K16055.
OMAi DRGHLAN.
PhylomeDBi Q9LRA7.

Gene expression databases

Genevestigatori Q9LRA7.

Family and domain databases

Gene3Di 3.40.50.1000. 2 hits.
InterProi IPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR006379. HAD-SF_hydro_IIB.
IPR003337. Trehalose_PPase.
[Graphical view ]
Pfami PF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view ]
SUPFAMi SSF56784. SSF56784. 1 hit.
TIGRFAMsi TIGR01484. HAD-SF-IIB. 1 hit.
TIGR00685. T6PP. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana."
    Leyman B., Van Dijck P., Thevelein J.M.
    Trends Plant Sci. 6:510-513(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiTPS9_ARATH
AccessioniPrimary (citable) accession number: Q9LRA7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: October 1, 2000
Last modified: October 1, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3