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Q9LRA7

- TPS9_ARATH

UniProt

Q9LRA7 - TPS9_ARATH

Protein

Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

Gene

TPS9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 85 (01 Oct 2014)
      Sequence version 1 (01 Oct 2000)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate.

    GO - Molecular functioni

    1. transferase activity, transferring glycosyl groups Source: UniProtKB-KW

    GO - Biological processi

    1. trehalose biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT20. Glycosyltransferase Family 20.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 (EC:2.4.1.15)
    Alternative name(s):
    Trehalose-6-phosphate synthase 9
    Short name:
    AtTPS9
    Gene namesi
    Name:TPS9
    Ordered Locus Names:At1g23870
    ORF Names:T23E23.3
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G23870.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 867867Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9PRO_0000324830Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei5 – 51PhosphoserineBy similarity
    Modified residuei32 – 321PhosphothreonineBy similarity

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    PaxDbiQ9LRA7.
    PRIDEiQ9LRA7.

    Expressioni

    Gene expression databases

    GenevestigatoriQ9LRA7.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G23870.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9LRA7.
    SMRiQ9LRA7. Positions 137-546.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni59 – 546488GlycosyltransferaseAdd
    BLAST

    Sequence similaritiesi

    In the N-terminal section; belongs to the glycosyltransferase 20 family.Curated
    In the C-terminal section; belongs to the trehalose phosphatase family.Curated

    Phylogenomic databases

    eggNOGiCOG0380.
    HOGENOMiHOG000191476.
    InParanoidiQ9LRA7.
    KOiK16055.
    OMAiDRGHLAN.
    PhylomeDBiQ9LRA7.

    Family and domain databases

    Gene3Di3.40.50.1000. 2 hits.
    InterProiIPR001830. Glyco_trans_20.
    IPR023214. HAD-like_dom.
    IPR006379. HAD-SF_hydro_IIB.
    IPR003337. Trehalose_PPase.
    [Graphical view]
    PfamiPF00982. Glyco_transf_20. 1 hit.
    PF02358. Trehalose_PPase. 1 hit.
    [Graphical view]
    SUPFAMiSSF56784. SSF56784. 1 hit.
    TIGRFAMsiTIGR01484. HAD-SF-IIB. 1 hit.
    TIGR00685. T6PP. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9LRA7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVSRSCANFL DLASWDLLDF PQTQRALPRV MTVPGIISEL DGGYSDGSSD    50
    VNSSNSSRER KIIVANMLPL QAKRDTETGQ WCFSWDEDSL LLQLRDGFSS 100
    DTEFVYIGSL NADIGISEQE EVSHKLLLDF NCVPTFLPKE MQEKFYLGFC 150
    KHHLWPLFHY MLPMFPDHGD RFDRRLWQAY VSANKIFSDR VMEVINPEED 200
    YVWIHDYHLM VLPTFLRKRF NRIKLGFFLH SPFPSSEIYR TLPVRDDLLR 250
    GLLNCDLIGF HTFDYARHFL SCCSRMLGLD YESKRGHIGL DYFGRTVFIK 300
    ILPVGIHMGR LESVLNLPST AAKMKEIQEQ FKGKKLILGV DDMDIFKGIS 350
    LKLIAMERLF ETYWHMRGKL VLIQIVNPAR ATGKDVEEAK KETYSTAKRI 400
    NERYGSAGYQ PVILIDRLVP RYEKTAYYAM ADCCLVNAVR DGMNLVPYKY 450
    IICRQGTPGM DKAMGISHDS ARTSMLVVSE FIGCSPSLSG AIRVNPWDVD 500
    AVAEAVNLAL TMGETEKRLR HEKHYHYVST HDVGYWAKSF MQDLERACRE 550
    HYNKRCWGIG FGLSFRVLSL SPSFRKLSID HIVSTYRNTQ RRAIFLDYDG 600
    TLVPESSIIK TPNAEVLSVL KSLCGDPKNT VFVVSGRGWE SLSDWLSPCE 650
    NLGIAAEHGY FIRWSSKKEW ETCYSSAEAE WKTMVEPVMR SYMDATDGST 700
    IEYKESALVW HHQDADPDFG ACQAKELLDH LESVLANEPV VVKRGQHIVE 750
    VKPQGVSKGL AVEKVIHQMV EDGNPPDMVM CIGDDRSDED MFESILSTVT 800
    NPDLPMPPEI FACTVGRKPS KAKYFLDDVS DVLKLLGGLA AATSSSKPEY 850
    QQQSSSLHTQ VAFESII 867
    Length:867
    Mass (Da):98,496
    Last modified:October 1, 2000 - v1
    Checksum:i606736BC2B78FE81
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC002423 Genomic DNA. Translation: AAF87136.1.
    CP002684 Genomic DNA. Translation: AEE30444.1.
    AY072210 mRNA. Translation: AAL60031.1.
    AY096366 mRNA. Translation: AAM20007.1.
    RefSeqiNP_173799.1. NM_102235.2.
    UniGeneiAt.41515.
    At.48224.

    Genome annotation databases

    EnsemblPlantsiAT1G23870.1; AT1G23870.1; AT1G23870.
    GeneIDi838998.
    KEGGiath:AT1G23870.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC002423 Genomic DNA. Translation: AAF87136.1 .
    CP002684 Genomic DNA. Translation: AEE30444.1 .
    AY072210 mRNA. Translation: AAL60031.1 .
    AY096366 mRNA. Translation: AAM20007.1 .
    RefSeqi NP_173799.1. NM_102235.2.
    UniGenei At.41515.
    At.48224.

    3D structure databases

    ProteinModelPortali Q9LRA7.
    SMRi Q9LRA7. Positions 137-546.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G23870.1-P.

    Protein family/group databases

    CAZyi GT20. Glycosyltransferase Family 20.

    Proteomic databases

    PaxDbi Q9LRA7.
    PRIDEi Q9LRA7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G23870.1 ; AT1G23870.1 ; AT1G23870 .
    GeneIDi 838998.
    KEGGi ath:AT1G23870.

    Organism-specific databases

    TAIRi AT1G23870.

    Phylogenomic databases

    eggNOGi COG0380.
    HOGENOMi HOG000191476.
    InParanoidi Q9LRA7.
    KOi K16055.
    OMAi DRGHLAN.
    PhylomeDBi Q9LRA7.

    Gene expression databases

    Genevestigatori Q9LRA7.

    Family and domain databases

    Gene3Di 3.40.50.1000. 2 hits.
    InterProi IPR001830. Glyco_trans_20.
    IPR023214. HAD-like_dom.
    IPR006379. HAD-SF_hydro_IIB.
    IPR003337. Trehalose_PPase.
    [Graphical view ]
    Pfami PF00982. Glyco_transf_20. 1 hit.
    PF02358. Trehalose_PPase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56784. SSF56784. 1 hit.
    TIGRFAMsi TIGR01484. HAD-SF-IIB. 1 hit.
    TIGR00685. T6PP. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    4. "An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana."
      Leyman B., Van Dijck P., Thevelein J.M.
      Trends Plant Sci. 6:510-513(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiTPS9_ARATH
    AccessioniPrimary (citable) accession number: Q9LRA7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 18, 2008
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 85 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3