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Protein

BTB/POZ domain-containing protein At1g01640

Gene

At1g01640

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processUbl conjugation pathway

Enzyme and pathway databases

UniPathwayiUPA00143.

Names & Taxonomyi

Protein namesi
Recommended name:
BTB/POZ domain-containing protein At1g01640
Gene namesi
Ordered Locus Names:At1g01640
ORF Names:T1N6.2
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRilocus:2198140. AT1G01640.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004059961 – 207BTB/POZ domain-containing protein At1g01640Add BLAST207

Proteomic databases

PaxDbiQ9LQ95.

Expressioni

Gene expression databases

ExpressionAtlasiQ9LQ95. baseline and differential.
GenevisibleiQ9LQ95. AT.

Interactioni

Subunit structurei

Interacts with CUL3A.1 Publication

GO - Molecular functioni

Protein-protein interaction databases

BioGridi24769. 3 interactors.
IntActiQ9LQ95. 3 interactors.
STRINGi3702.AT1G01640.1.

Structurei

3D structure databases

ProteinModelPortaliQ9LQ95.
SMRiQ9LQ95.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 94BTBPROSITE-ProRule annotationAdd BLAST71

Domaini

The BTB/POZ-like domain may mediate the interaction with some component of ubiquitin ligase complexes.1 Publication

Phylogenomic databases

eggNOGiKOG1987. Eukaryota.
ENOG410XQV8. LUCA.
HOGENOMiHOG000029690.
InParanoidiQ9LQ95.
KOiK10523.
OMAiPIPTHKA.
OrthoDBiEOG09360SLB.
PhylomeDBiQ9LQ95.

Family and domain databases

InterProiView protein in InterPro
IPR000210. BTB/POZ_dom.
IPR011333. SKP1/BTB/POZ.
PfamiView protein in Pfam
PF00651. BTB. 1 hit.
SMARTiView protein in SMART
SM00225. BTB. 1 hit.
SUPFAMiSSF54695. SSF54695. 1 hit.
PROSITEiView protein in PROSITE
PS50097. BTB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LQ95-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEAEQKAAF LGGLVVSFKE QMHTDVLVKP GEEAPPIPTH KAVLAARSKV
60 70 80 90 100
FRNMLDSDEC KTSPEESITL PDLSHDELKS LLEFLYSGNL KAPYNQYRSL
110 120 130 140 150
YLAADKYDIS YLQDVCRNHF IASLSSRNVL DILELASIPC DTILKDAAIN
160 170 180 190 200
HIVKHMEEVV VPMKYETFVQ RNPDLSVEIT RAYLRETKAK AKDHGAPLNG

NTRPRIW
Length:207
Mass (Da):23,372
Last modified:October 1, 2000 - v1
Checksum:iA108E941AE9221F0
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti79K → R in AAQ22660 (PubMed:14593172).Curated1
Sequence conflicti79K → R in BAF01519 (Ref. 4) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009273 Genomic DNA. Translation: AAF78396.1.
CP002684 Genomic DNA. Translation: AEE27315.1.
CP002684 Genomic DNA. Translation: AEE27316.1.
BT010191 mRNA. Translation: AAQ22660.1.
AK229678 mRNA. Translation: BAF01519.1.
PIRiC86147.
RefSeqiNP_001318902.1. NM_001331285.1.
NP_171670.1. NM_100046.4.
UniGeneiAt.14892.

Genome annotation databases

EnsemblPlantsiAT1G01640.1; AT1G01640.1; AT1G01640.
GeneIDi839534.
GrameneiAT1G01640.1; AT1G01640.1; AT1G01640.
KEGGiath:AT1G01640.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009273 Genomic DNA. Translation: AAF78396.1.
CP002684 Genomic DNA. Translation: AEE27315.1.
CP002684 Genomic DNA. Translation: AEE27316.1.
BT010191 mRNA. Translation: AAQ22660.1.
AK229678 mRNA. Translation: BAF01519.1.
PIRiC86147.
RefSeqiNP_001318902.1. NM_001331285.1.
NP_171670.1. NM_100046.4.
UniGeneiAt.14892.

3D structure databases

ProteinModelPortaliQ9LQ95.
SMRiQ9LQ95.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi24769. 3 interactors.
IntActiQ9LQ95. 3 interactors.
STRINGi3702.AT1G01640.1.

Proteomic databases

PaxDbiQ9LQ95.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G01640.1; AT1G01640.1; AT1G01640.
GeneIDi839534.
GrameneiAT1G01640.1; AT1G01640.1; AT1G01640.
KEGGiath:AT1G01640.

Organism-specific databases

AraportiAT1G01640.
TAIRilocus:2198140. AT1G01640.

Phylogenomic databases

eggNOGiKOG1987. Eukaryota.
ENOG410XQV8. LUCA.
HOGENOMiHOG000029690.
InParanoidiQ9LQ95.
KOiK10523.
OMAiPIPTHKA.
OrthoDBiEOG09360SLB.
PhylomeDBiQ9LQ95.

Enzyme and pathway databases

UniPathwayiUPA00143.

Miscellaneous databases

PROiQ9LQ95.

Gene expression databases

ExpressionAtlasiQ9LQ95. baseline and differential.
GenevisibleiQ9LQ95. AT.

Family and domain databases

InterProiView protein in InterPro
IPR000210. BTB/POZ_dom.
IPR011333. SKP1/BTB/POZ.
PfamiView protein in Pfam
PF00651. BTB. 1 hit.
SMARTiView protein in SMART
SM00225. BTB. 1 hit.
SUPFAMiSSF54695. SSF54695. 1 hit.
PROSITEiView protein in PROSITE
PS50097. BTB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY1164_ARATH
AccessioniPrimary (citable) accession number: Q9LQ95
Secondary accession number(s): Q7XA69
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: October 1, 2000
Last modified: February 15, 2017
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.