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Q9LQ81 (ADF10_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified September 21, 2011. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Actin-depolymerizing factor 10
Short name=ADF-10
Short name=AtADF10
Gene names
Name:ADF10
Ordered Locus Names:At1g01750
ORF Names:T1N6.16
OrganismArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length140 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers By similarity.

Sequence similarities

Belongs to the actin-binding proteins ADF family.

Contains 1 ADF-H domain.

Ontologies

Keywords
   LigandActin-binding
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular functionactin binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 140140Actin-depolymerizing factor 10
PRO_0000214929

Regions

Domain7 – 139133ADF-H

Sequences

Sequence LengthMass (Da)Tools
Q9LQ81 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: B9845FF24B637859

FASTA14016,342
        10         20         30         40         50         60 
MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI 

        70         80         90        100        110        120 
PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK MLYASSKDRF KRELDGIQVE 

       130        140 
LQATDPSEMS LDIIKGRVNL

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed: 14593172] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Full-length cDNA from Arabidopsis thaliana."
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[5]"Comparative study of rice and Arabidopsis actin-depolymerizing factors gene families."
Feng Y., Liu Q., Xue Q.
J. Plant Physiol. 163:69-79(2006) [PubMed: 16360805] [Abstract]
Cited for: GENE FAMILY.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AC009273 Genomic DNA. Translation: AAF78408.1.
CP002684 Genomic DNA. Translation: AEE27331.1.
AY072410 mRNA. Translation: AAL62402.1.
BT001250 mRNA. Translation: AAN65137.1.
AY088305 mRNA. Translation: AAM65844.1.
IPIIPI00533839.
PIRA86149.
RefSeqNP_171680.1. NM_100058.1.
UniGeneAt.43294.

3D structure databases

ProteinModelPortalQ9LQ81.
SMRQ9LQ81. Positions 5-128.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9LQ81.

Proteomic databases

PRIDEQ9LQ81.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G01750.1; AT1G01750.1; AT1G01750.
GeneID839281.
GenomeReviewsGene locus AT1G01750 in contig CT485782_GR.
KEGGath:AT1G01750.
NMPDRfig|3702.1.peg.287.

Organism-specific databases

TAIRAt1g01750.

Phylogenomic databases

eggNOGKOG1735.
GeneTreeEPGT00050000005182.
HOGENOMHBG628477.
InParanoidQ9LQ81.
OMAIVFKINE.
PhylomeDBQ9LQ81.
ProtClustDBCLSN2682878.

Gene expression databases

ArrayExpressQ9LQ81.
GenevestigatorQ9LQ81.
GermOnlineAT1G01750. Arabidopsis thaliana.

Family and domain databases

InterProIPR002108. Actin-bd_cofilin/tropomyosin.
[Graphical view]
PfamPF00241. Cofilin_ADF. 1 hit.
[Graphical view]
SMARTSM00102. ADF. 1 hit.
[Graphical view]
PROSITEPS51263. ADF_H. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameADF10_ARATH
AccessionPrimary (citable) accession number: Q9LQ81
Entry history
Integrated into UniProtKB/Swiss-Prot: November 2, 2001
Last sequence update: October 1, 2000
Last modified: September 21, 2011
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents