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Protein

Probable 6-phosphogluconolactonase 1

Gene

At1g13700

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.By similarity

Catalytic activityi

6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.

Pathwayi

GO - Molecular functioni

  1. 6-phosphogluconolactonase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. pentose-phosphate shunt Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciARA:AT1G13700-MONOMER.
BRENDAi3.1.1.31. 399.
ReactomeiREACT_281719. Pentose phosphate pathway (hexose monophosphate shunt).
UniPathwayiUPA00115; UER00409.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable 6-phosphogluconolactonase 1 (EC:3.1.1.31)
Short name:
6PGL 1
Gene namesi
Ordered Locus Names:At1g13700
ORF Names:F21F23.14
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G13700.

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 268268Probable 6-phosphogluconolactonase 1PRO_0000288668Add
BLAST

Proteomic databases

PaxDbiQ9LMX8.
PRIDEiQ9LMX8.

Expressioni

Gene expression databases

GenevestigatoriQ9LMX8.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G13700.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9LMX8.
SMRiQ9LMX8. Positions 13-261.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0363.
HOGENOMiHOG000256285.
InParanoidiQ9LMX8.
KOiK01057.
OMAiQGQSKLA.
PhylomeDBiQ9LMX8.

Family and domain databases

InterProiIPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view]
PfamiPF01182. Glucosamine_iso. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01198. pgl. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LMX8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALTWTHKDR GEIRVHENLE ELSIDLVDYI AEISEASIKE HGAFCIVLSG
60 70 80 90 100
GSLISFMGKL IEPPYDKIVD WAKWYVFWAD ERVVAKNHDD SNYKLAKDNL
110 120 130 140 150
LSKVNVFPRH ICSINDTVSA EEAATEYEFA IRQMVRSRTV AASDNSDSPR
160 170 180 190 200
FDLILLGMGS DGHVASLFPN HPALEVKDDW VTFLTDSHKP PPERITFTLP
210 220 230 240 250
VINSAANVVV VATGESKANA IHLAIDDLPL PDSSLSLPAR LVHPSNGNLI
260
WFMDKQAGSK LDRFKFSE
Length:268
Mass (Da):29,887
Last modified:October 1, 2000 - v1
Checksum:iBF11D4FAC1E81294
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC027656 Genomic DNA. Translation: AAF81297.1.
CP002684 Genomic DNA. Translation: AEE29059.1.
BT014903 mRNA. Translation: AAT46032.1.
BT015753 mRNA. Translation: AAU84690.1.
PIRiD86270.
RefSeqiNP_172826.1. NM_101239.3.
UniGeneiAt.42014.
At.66943.

Genome annotation databases

EnsemblPlantsiAT1G13700.1; AT1G13700.1; AT1G13700.
GeneIDi837931.
KEGGiath:AT1G13700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC027656 Genomic DNA. Translation: AAF81297.1.
CP002684 Genomic DNA. Translation: AEE29059.1.
BT014903 mRNA. Translation: AAT46032.1.
BT015753 mRNA. Translation: AAU84690.1.
PIRiD86270.
RefSeqiNP_172826.1. NM_101239.3.
UniGeneiAt.42014.
At.66943.

3D structure databases

ProteinModelPortaliQ9LMX8.
SMRiQ9LMX8. Positions 13-261.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G13700.1-P.

Proteomic databases

PaxDbiQ9LMX8.
PRIDEiQ9LMX8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G13700.1; AT1G13700.1; AT1G13700.
GeneIDi837931.
KEGGiath:AT1G13700.

Organism-specific databases

TAIRiAT1G13700.

Phylogenomic databases

eggNOGiCOG0363.
HOGENOMiHOG000256285.
InParanoidiQ9LMX8.
KOiK01057.
OMAiQGQSKLA.
PhylomeDBiQ9LMX8.

Enzyme and pathway databases

UniPathwayiUPA00115; UER00409.
BioCyciARA:AT1G13700-MONOMER.
BRENDAi3.1.1.31. 399.
ReactomeiREACT_281719. Pentose phosphate pathway (hexose monophosphate shunt).

Gene expression databases

GenevestigatoriQ9LMX8.

Family and domain databases

InterProiIPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view]
PfamiPF01182. Glucosamine_iso. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01198. pgl. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Arabidopsis ORF clones."
    Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.
    Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.

Entry informationi

Entry namei6PGL1_ARATH
AccessioniPrimary (citable) accession number: Q9LMX8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: October 1, 2000
Last modified: April 1, 2015
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.