Q9LM93 (Q9LM93_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
At1g20575 EMBL AAO64810.1

Submitted name:
Dolichol-phosphate mannosyltransferase EMBL AEE29989.1
Submitted name:
F2D10.6 EMBL AAF80640.1
Submitted name:
Putative uncharacterized protein At1g20570 EMBL BAD43322.1

Gene names

Name:	At1g20570 EMBL BAD43322.1
Ordered Locus Names:	At1g20575 TAIR At1g20575
ORF Names:	AT1G20575 EMBL AEE29989.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	246 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Molecular function	Glycosyltransferase RuleBase RU003687 EMBL AEE29989.1 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	response to ammonium ion Inferred from mutant phenotype PubMed 21558543. Source: TAIR
Cellular_component	dolichol-phosphate-mannose synthase complex Inferred from physical interaction PubMed 21558543. Source: TAIR endoplasmic reticulum Inferred from direct assay PubMed 21558543PubMed 22923678. Source: TAIR
Molecular_function	transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9LM93 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 3EE65927B87B8A9C	FASTA	246	27,676
	10 20 30 40 50 60 MADEMETKGE KKYKYSIIIP TYNERLNIAI IVYLIFKHLR DVDFEIIVVD DGSPDGTQEI 70 80 90 100 110 120 VKQLQQLYGE DRILLRARAK KLGLGTAYIH GLKHATGDFV VIMDADLSHH PKYLPSFIKK 130 140 150 160 170 180 QLETNASIVT GTRYVKGGGV HGWNLMRKLT SRGANVLAQT LLWPGVSDLT GSFRLYKKSA 190 200 210 220 230 240 LEDVISSCVS KGYVFQMEMI VRATRKGYHI EEVPITFVDR VFGTSKLGGS EIVEYLKGLV YLLLTT

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	"Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I." Shinn P., Brooks S., Buehler E., Chao Q., Johnson-Hopson C., Khan S., Kim C., Altafi H., Bei Q., Chin C., Chiou J., Choi E., Conn L., Conway A., Gonzales A., Hansen N., Howing B., Koo T. , Lam B., Lee J., Lenz C., Li J., Liu A., Liu K., Liu S., Mukharsky N., Nguyen M., Palm C., Pham P., Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M., Vaysberg M., Yu G., Federspiel N.A., Theologis A., Ecker J.R. Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Shinn P., Brooks S., Buehler E., Chao Q., Cheuk R., Johnson-Hopson C., Khan S., Kim C., Altafi H., Bei B., Chin C., Chiou J., Choi E., Conn L., Conway A., Gonzalez A., Hansen N., Howing B. , Koo T., Lam B., Lee J., Lenz C., Li J., Liu A., Liu J., Liu S., Mukharsky N., Nguyen M., Palm C., Pham P., Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M., Vaysberg M., Yu G., Davis R., Federspiel N., Theologis A., Ecker J. Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Arabidopsis ORF clones." Cheuk R., Chen H., Kim C.J., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs." Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K. , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K. Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[6]	"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs." Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K. , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K. Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[7]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC069251 Genomic DNA. Translation: AAF80640.1. BT005875 mRNA. Translation: AAO64810.1. CP002684 Genomic DNA. Translation: AEE29989.1. AK175559 mRNA. Translation: BAD43322.1. AK227450 mRNA. Translation: BAE99453.1.
IPI	IPI00547649.
PIR	H86338.
RefSeq	NP_564118.1. NM_101908.3.
UniGene	At.27953.
3D structure databases
SMR	Q9LM93. Positions 14-135.
ModBase	Search...
Protein family/group databases
CAZy	GT2. Glycosyltransferase Family 2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G20575.1; AT1G20575.1; AT1G20575.
GeneID	838646.
KEGG	ath:AT1G20575.
Organism-specific databases
TAIR	At1g20575.
Phylogenomic databases
HOGENOM	HOG000283250.
InParanoid	Q9LM93.
KO	K00721.
OMA	EAMLNCH.
ProtClustDB	PLN02726.
Enzyme and pathway databases
BioCyc	MetaCyc:AT1G20575-MONOMER.
Gene expression databases
Genevestigator	Q9LM93.
Family and domain databases
InterPro	IPR001173. Glyco_trans_2. [Graphical view]
Pfam	PF00535. Glycos_transf_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9LM93_ARATH

Accession

Primary (citable) accession number: Q9LM93

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	May 1, 2013
This is version 83 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)