Non-specific lipid-transfer protein 4 precursor - Arabidopsis thaliana (Mouse-ear cress)

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Q9LLR6 (NLTP4_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 83. History...

Clusters with 100%, 90%, 50% identity |

Documents (2) |

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Non-specific lipid-transfer protein 4
Short name=LTP 4

Gene names

Name:	LTP4
Ordered Locus Names:	At5g59310
ORF Names:	MNC17.22

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	112 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues By similarity.
Sequence similarities	Belongs to the plant LTP family.
Sequence caution	The sequence BAB09776.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
Biological process	Transport
Domain	Signal
Ligand	Lipid-binding
PTM	Disulfide bond
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	lipid transport Traceable author statement Ref.1. Source: TAIR response to abscisic acid stimulus Inferred from expression pattern Ref.1. Source: TAIR response to salt stress Inferred from expression pattern PubMed 20667964. Source: TAIR response to water deprivation Inferred from expression pattern PubMed 18552355 PubMed 20667964. Source: TAIR
Molecular_function	lipid binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Signal peptide

1 – 23

Potential

Chain

24 – 112

Non-specific lipid-transfer protein 4

PRO_0000018364

Amino acid modifications

Disulfide bond

27 ↔ 74

Potential

Disulfide bond

37 ↔ 51

Potential

Disulfide bond

52 ↔ 94

Potential

Disulfide bond

72 ↔ 108

Potential

Sequences

Sequence

Length

Mass (Da)

Tools

Q9LLR6 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 7B9ED24A794CEA01
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FASTA

112

11,405

        10         20         30         40         50         60 
MAFALRFFTC FVLTVFIVAS VDAAITCGTV ASSLSPCLGY LSKGGVVPPP CCAGVKKLNG 

        70         80         90        100        110 
MAQTTPDRQQ ACRCLQSAAK GVNPSLASGL PGKCGVSIPY PISTSTNCAT IK

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Lipid transfer proteins are encoded by a small multigene family in Arabidopsis thaliana." Arondel V.A., Vergnolle C., Cantrel C., Kader J.-C. Plant Sci. 157:1-12(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Columbia.
[2]	"Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones." Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N., Tabata S. DNA Res. 5:379-391(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[4]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R. Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[5]	"Full-length cDNA from Arabidopsis thaliana." Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[6]	"Plant pathogenesis-related (PR) proteins: a focus on PR peptides." Sels J., Mathys J., De Coninck B.M.A., Cammue B.P.A., De Bolle M.F.C. Plant Physiol. Biochem. 46:941-950(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF159801 mRNA. Translation: AAF76930.1. AB016890 Genomic DNA. Translation: BAB09776.1. Sequence problems. CP002688 Genomic DNA. Translation: AED97170.1. AY058233 mRNA. Translation: AAL15407.1. AY035015 mRNA. Translation: AAK59520.1. AY045644 mRNA. Translation: AAK74002.1. AY059081 mRNA. Translation: AAL15187.1. BT002397 mRNA. Translation: AAO00757.1. BT006514 mRNA. Translation: AAP21322.1. AY088209 mRNA. Translation: AAM65751.1.
IPI	IPI00517749.
RefSeq	NP_568904.1. NM_125322.2.
UniGene	At.25116.
3D structure databases
ProteinModelPortal	Q9LLR6.
SMR	Q9LLR6. Positions 25-112.
ModBase	Search...
Proteomic databases
PaxDb	Q9LLR6.
PRIDE	Q9LLR6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G59310.1; AT5G59310.1; AT5G59310.
GeneID	836050.
KEGG	ath:AT5G59310.
Organism-specific databases
TAIR	At5g59310.
Phylogenomic databases
eggNOG	NOG246791.
HOGENOM	HOG000237659.
InParanoid	Q9LLR6.
OMA	TSTNCAT.
PhylomeDB	Q9LLR6.
ProtClustDB	CLSN2690050.
Gene expression databases
Genevestigator	Q9LLR6.
GermOnline	AT5G59310. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR016140. Bifunc_inhib/LTP/seed_store. IPR000528. Plant_LTP. [Graphical view]
Pfam	PF00234. Tryp_alpha_amyl. 1 hit. [Graphical view]
PRINTS	PR00382. LIPIDTRNSFER.
SMART	SM00499. AAI. 1 hit. [Graphical view]
SUPFAM	SSF47699. Bifunc_inhib/LTP/seed_store. 1 hit.
PROSITE	PS00597. PLANT_LTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

NLTP4_ARATH

Accession

Primary (citable) accession number: Q9LLR6
Secondary accession number(s): Q9FIE7

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 23, 2003
Last sequence update:	October 1, 2000
Last modified:	May 1, 2013
This is version 83 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Amino acid modifications

Sequences

References

Cross-references

Sequence databases

3D structure databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

Entry information

Relevant documents