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Q9LKR7

- BGL24_ARATH

UniProt

Q9LKR7 - BGL24_ARATH

Protein

Beta-glucosidase 24

Gene

BGLU24

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 76 (01 Oct 2014)
      Sequence version 2 (24 Nov 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei58 – 581SubstrateBy similarity
    Binding sitei161 – 1611SubstrateBy similarity
    Binding sitei206 – 2061SubstrateBy similarity
    Active sitei207 – 2071Proton donorBy similarity
    Binding sitei355 – 3551SubstrateBy similarity
    Active sitei427 – 4271NucleophileBy similarity
    Binding sitei477 – 4771SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Enzyme and pathway databases

    BioCyciARA:AT5G28510-MONOMER.

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 24 (EC:3.2.1.21)
    Short name:
    AtBGLU24
    Gene namesi
    Name:BGLU24
    Ordered Locus Names:At5g28510
    ORF Names:T26D3.6
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 5

    Organism-specific databases

    TAIRiAT5G28510.

    Subcellular locationi

    Endoplasmic reticulum lumen PROSITE-ProRule annotation

    GO - Cellular componenti

    1. endoplasmic reticulum lumen Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Endoplasmic reticulum

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2626Sequence AnalysisAdd
    BLAST
    Chaini27 – 533507Beta-glucosidase 24PRO_0000389586Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi64 – 641N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi88 – 881N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi226 ↔ 239By similarity
    Glycosylationi388 – 3881N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi437 – 4371N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi442 – 4421N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi470 – 4701N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi503 – 5031N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Proteomic databases

    PaxDbiQ9LKR7.
    PRIDEiQ9LKR7.

    Expressioni

    Gene expression databases

    GenevestigatoriQ9LKR7.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT5G28510.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9LKR7.
    SMRiQ9LKR7. Positions 41-520.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni484 – 4852Substrate bindingBy similarity

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi530 – 5334Prevents secretion from ERPROSITE-ProRule annotation

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    HOGENOMiHOG000088630.
    InParanoidiQ9LKR7.
    KOiK01188.
    OMAiIIMENGY.
    PhylomeDBiQ9LKR7.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00014. ER_TARGET. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9LKR7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVLQKLPLMS IGLLWLLIIV GPLVNADGPV CPPKPSDKLS RAHFPKGFLF    50
    GTATAAYQVE GAVNETCRGP SVWDIYCKKY PEKCNGDNGT QAVDFFYRYK 100
    EDIQLMKNLN TDSFRLSISW TRIFPHGREE NGVSKSGVQF YHDLIDELKR 150
    NGIIPFVTVF HWDTPQTLEN EYGGFLSAHI VKDFREYAEF VFKEYGGKVK 200
    HWITFNEPWV FAHAGYDVGK KAPGRCSPYA KDETVKGDCL GGRSGYEAYL 250
    VSHNLLNAHA EAVEAFRQCE KCKGGKIGIA HSPAWFEPHD FKDEQSGATI 300
    DRALDFIMGW HLDTTMFGDY PQTMKDIVGH RLPKFTTEQI AKLKNSADFV 350
    GINYYTSTFS KHLEKPNHAE PKFKQDSLVE WKNKNVNNIT IGSKPETGPL 400
    PVYSTGFRKV LKYVKDKYAN PEIIIMENGY GENLKENDSV ENGTADYNRE 450
    SYLKKHLWSM HKAICEDKVN VTGYFVWSLM DNFEWQDGFK NRFGLYYIDY 500
    KNNLTRHEKV SGKYYREFLS EGVRPSAIKK DEL 533
    Length:533
    Mass (Da):61,034
    Last modified:November 24, 2009 - v2
    Checksum:i062E9D4C144E4884
    GO

    Sequence cautioni

    The sequence AAF88017.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF262043 Genomic DNA. Translation: AAF88017.1. Sequence problems.
    CP002688 Genomic DNA. Translation: AED93809.1.
    RefSeqiNP_198203.1. NM_122734.1.
    UniGeneiAt.30739.
    At.47576.

    Genome annotation databases

    EnsemblPlantsiAT5G28510.1; AT5G28510.1; AT5G28510.
    GeneIDi832944.
    KEGGiath:AT5G28510.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF262043 Genomic DNA. Translation: AAF88017.1 . Sequence problems.
    CP002688 Genomic DNA. Translation: AED93809.1 .
    RefSeqi NP_198203.1. NM_122734.1.
    UniGenei At.30739.
    At.47576.

    3D structure databases

    ProteinModelPortali Q9LKR7.
    SMRi Q9LKR7. Positions 41-520.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT5G28510.1-P.

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Proteomic databases

    PaxDbi Q9LKR7.
    PRIDEi Q9LKR7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT5G28510.1 ; AT5G28510.1 ; AT5G28510 .
    GeneIDi 832944.
    KEGGi ath:AT5G28510.

    Organism-specific databases

    TAIRi AT5G28510.

    Phylogenomic databases

    eggNOGi COG2723.
    HOGENOMi HOG000088630.
    InParanoidi Q9LKR7.
    KOi K01188.
    OMAi IIMENGY.
    PhylomeDBi Q9LKR7.

    Enzyme and pathway databases

    BioCyci ARA:AT5G28510-MONOMER.

    Gene expression databases

    Genevestigatori Q9LKR7.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00014. ER_TARGET. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
      Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.
      , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
      Nature 408:823-826(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL24_ARATH
    AccessioniPrimary (citable) accession number: Q9LKR7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 24, 2009
    Last sequence update: November 24, 2009
    Last modified: October 1, 2014
    This is version 76 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3