Q9LKA5 (UMP1_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein At3g15000, mitochondrial

Gene names

Ordered Locus Names:	At3g15000
ORF Names:	K15M2.14

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location

Mitochondrion Ref.4 Ref.5.

Ontologies

Keywords
Cellular component	Mitochondrion
Technical term	Complete proteome Direct protein sequencing Reference proteome
Gene Ontology (GO)
Cellular component	mitochondrion Inferred from direct assay Ref.4Ref.5. Source: TAIR
Molecular function	cobalt ion binding Inferred from direct assay. Source: TAIR protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
CDKC-1	Q9LFT8	2	EBI-2025869,EBI-2025736

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 395	395	Uncharacterized protein At3g15000, mitochondrial		PRO_0000220586

Sequences

	Sequence		Length	Mass (Da)
	Q9LKA5 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: D15E5CCC89E2A33C	FASTA	395	42,870
	10 20 30 40 50 60 MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV 70 80 90 100 110 120 SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW LVVVEPPQGE PTRDEIIDSY 130 140 150 160 170 180 IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN 190 200 210 220 230 240 KDYGGEPFID GKAVPYDPKY HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG 250 260 270 280 290 300 PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA 310 320 330 340 350 360 PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP 370 380 390 PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones." Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S. DNA Res. 7:217-221(2000) [PubMed: 10907853] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"Proteomic approach to identify novel mitochondrial proteins in Arabidopsis." Kruft V., Eubel H., Jaensch L., Werhahn W., Braun H.-P. Plant Physiol. 127:1694-1710(2001) [PubMed: 11743114] [Abstract] Cited for: PROTEIN SEQUENCE OF 169-179, SUBCELLULAR LOCATION. Tissue: Leaf and Stem.
[5]	"Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins." Heazlewood J.L., Tonti-Filippini J.S., Gout A.M., Day D.A., Whelan J., Millar A.H. Plant Cell 16:241-256(2004) [PubMed: 14671022] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. Strain: cv. Landsberg erecta.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP000370 Genomic DNA. Translation: BAA97063.1. CP002686 Genomic DNA. Translation: AEE75601.1. AF428427 mRNA. Translation: AAL16196.1.
IPI	IPI00532410.
RefSeq	NP_566496.1. NM_112362.3.
UniGene	At.24349. At.67750.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9LKA5. 2 interactions.
STRING	Q9LKA5.
Proteomic databases
PRIDE	Q9LKA5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT3G15000.1; AT3G15000.1; AT3G15000.
GeneID	820729.
GenomeReviews	Gene locus AT3G15000 in contig BA000014_GR.
KEGG	ath:AT3G15000.
NMPDR	fig|3702.1.peg.13647.
Organism-specific databases
GeneFarm	775. 95.
TAIR	At3g15000.
Phylogenomic databases
GeneTree	EPGT00050000002825.
InParanoid	Q9LKA5.
OMA	GAPPQNN.
PhylomeDB	Q9LKA5.
ProtClustDB	CLSN2915005.
Gene expression databases
ArrayExpress	Q9LKA5.
Genevestigator	Q9LKA5.
GermOnline	AT3G15000. Arabidopsis thaliana.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

UMP1_ARATH

Accession

Primary (citable) accession number: Q9LKA5

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 15, 2002
Last sequence update:	October 1, 2000
Last modified:	December 14, 2011
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program