Reviewed, UniProtKB/Swiss-Prot Q9LKA5 (UMP1_ARATH)

Names and origin

Protein names

Recommended name:
    Uncharacterized protein At3g15000, mitochondrial

Gene names

Ordered Locus Names:	At3g15000
ORF Names:	K15M2.14

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Subcellular location

Mitochondrion.

Ontologies

Keywords
Cellular component	Mitochondrion
Technical term	Complete proteome Direct protein sequencing
Gene Ontology (GO)
Cellular component	mitochondrion Ref.3 Ref.4 Inferred from direct assay. Source: TAIR
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
CDKC-1	Q9LFT8	1	EBI-2025869,EBI-2025736
CDKC-2	Q8W4P1	1	EBI-2025869,EBI-2025894

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 395	395	Uncharacterized protein At3g15000, mitochondrial		PRO_0000220586

Sequences

	Sequence		Length	Mass (Da)
	Q9LKA5-1 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: D15E5CCC89E2A33C	FASTA	395	42,870
	10 20 30 40 50 60 MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV 70 80 90 100 110 120 SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW LVVVEPPQGE PTRDEIIDSY 130 140 150 160 170 180 IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN 190 200 210 220 230 240 KDYGGEPFID GKAVPYDPKY HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG 250 260 270 280 290 300 PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA 310 320 330 340 350 360 PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP 370 380 390 PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

References

[1]	"Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones." Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S. DNA Res. 7:217-221(2000) [PubMed: 10907853] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[3]	"Proteomic approach to identify novel mitochondrial proteins in Arabidopsis." Kruft V., Eubel H., Jaensch L., Werhahn W., Braun H.-P. Plant Physiol. 127:1694-1710(2001) [PubMed: 11743114] [Abstract] Cited for: PROTEIN SEQUENCE OF 169-179, SUBCELLULAR LOCATION. Tissue: Leaf and Stem.
[4]	"Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins." Heazlewood J.L., Tonti-Filippini J.S., Gout A.M., Day D.A., Whelan J., Millar A.H. Plant Cell 16:241-256(2004) [PubMed: 14671022] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AP000370 Genomic DNA. Translation: BAA97063.1. AF428427 mRNA. Translation: AAL16196.1.
IPI	IPI00532410.
RefSeq	NP_566496.1.
UniGene	At.24349 At.67750
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9LKA5. 2 interactions.
STRING	Q9LKA5.
Proteomic databases
PRIDE	Q9LKA5.
Genome annotation databases
GeneID	820729.
GenomeReviews	Gene locus AT3G15000 in contig BA000014_GR.
KEGG	ath:AT3G15000.
NMPDR	fig|3702.1.peg.13647.
Organism-specific databases
GeneFarm	775. 95.
TAIR	At3g15000.
Phylogenomic databases
OMA	GAPPSNY
Gene expression databases
ArrayExpress	Q9LKA5.
Genevestigator	Q9LKA5.
GermOnline	AT3G15000. Arabidopsis thaliana.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

UMP1_ARATH

Accession

Primary (citable) accession number: Q9LKA5

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 15, 2002
Last sequence update:	October 1, 2000
Last modified:	November 3, 2009
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)