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Protein

Ras-related protein RABA1g

Gene

RABA1G

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Intracellular vesicle trafficking and protein transport.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi20 – 27GTPBy similarity8
Nucleotide bindingi68 – 72GTPBy similarity5
Nucleotide bindingi126 – 129GTPBy similarity4
Nucleotide bindingi156 – 157GTPBy similarity2

GO - Molecular functioni

GO - Biological processi

  • cell wall biogenesis Source: TAIR
  • protein transport Source: UniProtKB-KW
  • response to cadmium ion Source: TAIR

Keywordsi

Biological processProtein transport, Transport
LigandGTP-binding, Nucleotide-binding

Enzyme and pathway databases

ReactomeiR-ATH-5620916. VxPx cargo-targeting to cilium.
R-ATH-8873719. RAB geranylgeranylation.

Names & Taxonomyi

Protein namesi
Recommended name:
Ras-related protein RABA1g
Short name:
AtRABA1g
Gene namesi
Name:RABA1G
Ordered Locus Names:At3g15060
ORF Names:K15M2.21
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G15060.
TAIRilocus:2086290. AT3G15060.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004073381 – 217Ras-related protein RABA1gAdd BLAST217

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi214S-geranylgeranyl cysteineBy similarity1
Lipidationi215S-geranylgeranyl cysteineBy similarity1

Keywords - PTMi

Lipoprotein, Prenylation

Proteomic databases

PaxDbiQ9LK99.
PRIDEiQ9LK99.

PTM databases

iPTMnetiQ9LK99.

Expressioni

Gene expression databases

ExpressionAtlasiQ9LK99. baseline and differential.
GenevisibleiQ9LK99. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G15060.1.

Structurei

3D structure databases

ProteinModelPortaliQ9LK99.
SMRiQ9LK99.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi42 – 50Effector regionBy similarity9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0087. Eukaryota.
COG1100. LUCA.
HOGENOMiHOG000233968.
InParanoidiQ9LK99.
KOiK07976.
OMAiVKKIGCC.
OrthoDBiEOG09360LT0.
PhylomeDBiQ9LK99.

Family and domain databases

InterProiView protein in InterPro
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
PfamiView protein in Pfam
PF00071. Ras. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
PROSITEiView protein in PROSITE
PS51419. RAB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LK99-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAYRADDDY DFLYKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF
60 70 80 90 100
ATRSIHVDEK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
110 120 130 140 150
FENVERWLKE LRDHTEANIV IMLVGNKADL RHLRAVSTED AKAFAERENT
160 170 180 190 200
FFMETSALEA LNVENAFTEV LSQIYRVASK KALDIGDDHT TLPKGQSINV
210
GSKDDVSEVK KVGCCSS
Length:217
Mass (Da):24,283
Last modified:October 1, 2000 - v1
Checksum:iAE67F39176DAC5DE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000370 Genomic DNA. Translation: BAA97069.1.
CP002686 Genomic DNA. Translation: AEE75611.1.
AK118727 mRNA. Translation: BAC43321.1.
BT005565 mRNA. Translation: AAO63985.1.
RefSeqiNP_188124.1. NM_112368.4.
UniGeneiAt.24446.
At.70390.

Genome annotation databases

EnsemblPlantsiAT3G15060.1; AT3G15060.1; AT3G15060.
GeneIDi820735.
GrameneiAT3G15060.1; AT3G15060.1; AT3G15060.
KEGGiath:AT3G15060.

Similar proteinsi

Entry informationi

Entry nameiRAA1G_ARATH
AccessioniPrimary (citable) accession number: Q9LK99
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 3, 2011
Last sequence update: October 1, 2000
Last modified: September 27, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families