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Q9LK11 (Q9LK11_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Beta-1,3-glucanase-like protein EMBL BAB02933.1
Submitted name:
Glycosyl hydrolase family 17 protein EMBL AAY78755.1
Submitted name:
O-Glycosyl hydrolases family 17 protein EMBL AEE76890.1
Gene names
Ordered Locus Names:At3g24330 EMBL AAY78755.1 TAIR At3g24330
ORF Names:AT3G24330 EMBL AEE76890.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL BAB02933.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 17 family. RuleBase RU004335

Sequences

Sequence LengthMass (Da)Tools
Q9LK11 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: F67DD8E57E1312D8

FASTA50055,656
        10         20         30         40         50         60 
MAGERSKLTT NHFYNHQIIL CYFLIISQVS IASSNTSNVG VNWGIMASHQ LPPEKVVKML 

        70         80         90        100        110        120 
MDNSFTKLKL FEADQNILDA LIGSDIEVMI GIPNRFLKEM AQDTSVAASW VEENVTAYSY 

       130        140        150        160        170        180 
NGGVNIKYIA VGNEPFLQTY NGTYVEFTLP ALINIQRALE EADLKNVKVT VPFNADIYFS 

       190        200        210        220        230        240 
PEANPVPSAG DFRPELRDAT IEIINFLYSH DSPFTVNIYP FLSLYGNAYF PLDFAFFDGT 

       250        260        270        280        290        300 
NKSLRDGNLV YTNVFDANLD TLICAMERYS FLGMKIIVGE VGWPTDGDKN ANVKSAKRFN 

       310        320        330        340        350        360 
QGMVKHAMSG NGTPARKGVI MDVYLFSLVD EDAKSIAPGT FERHWGIFEF DGRPKYELDL 

       370        380        390        400        410        420 
SGKGNDKPLV PVEDVKYLPK TWCILDPNAY NLDDLPDNID YACSLSDCTA LGYGSSCNHL 

       430        440        450        460        470        480 
TATGNVSYAF NMYYQMHDQK TWDCDFLGLG LITDEDPSDE LCEFPVMIDT GDSTRLQPGS 

       490        500 
SRVLTRVAAA VLVMLVLPIL

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed: 11130713] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones."
Nakamura Y.
DNA Res. 7:217-221(2000) [PubMed: 10907853] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]Underwood B.A., Xiao Y., Moskal W., Monaghan E., Wang W., Redman J., Wu H.C., Utterback T., Town C.D.
Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]Arabidopsis TAIR10 Release
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[6]Kaneko T., Kato T., Sato S., Nakamura Y., Asamizu E., Tabata S.
Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DQ056607 mRNA. Translation: AAY78755.1.
CP002686 Genomic DNA. Translation: AEE76890.1.
AP000382 Genomic DNA. Translation: BAB02933.1.
IPIIPI00530734.
RefSeqNP_189076.1. NM_113340.1.
UniGeneAt.53470.
At.68169.

3D structure databases

HSSPHSSP built from PDB template 1GHS based on UniProtKB P15737.
ProteinModelPortalQ9LK11.
SMRQ9LK11. Positions 38-361, 375-467.
ModBaseSearch...

Protein family/group databases

CAZyCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Proteomic databases

PRIDEQ9LK11.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT3G24330.1; AT3G24330.1; AT3G24330.
GeneID822022.
KEGGath:AT3G24330.
NMPDRfig|3702.1.peg.14696.

Organism-specific databases

TAIRAt3g24330.

Phylogenomic databases

GeneTreeEPGT00050000009360.
InParanoidQ9LK11.
OMAYGSSCNH.
PhylomeDBQ9LK11.
ProtClustDBCLSN2914812.

Gene expression databases

GenevestigatorQ9LK11.

Family and domain databases

InterProIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTSM00768. X8. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9LK11_ARATH
AccessionPrimary (citable) accession number: Q9LK11
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info