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Protein

Probable prefoldin subunit 2

Gene

At3g22480

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity).By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Chaperone

Names & Taxonomyi

Protein namesi
Recommended name:
Probable prefoldin subunit 2
Gene namesi
Ordered Locus Names:At3g22480
ORF Names:F16J14.4
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G22480.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001248391 – 148Probable prefoldin subunit 2Add BLAST148

Proteomic databases

PaxDbiQ9LJ98.
PRIDEiQ9LJ98.

PTM databases

iPTMnetiQ9LJ98.

Expressioni

Gene expression databases

ExpressionAtlasiQ9LJ98. baseline and differential.
GenevisibleiQ9LJ98. AT.

Interactioni

Subunit structurei

Heterohexamer of two PFD-alpha type and four PFD-beta type subunits.By similarity

Protein-protein interaction databases

STRINGi3702.AT3G22480.1.

Structurei

3D structure databases

ProteinModelPortaliQ9LJ98.
SMRiQ9LJ98.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the prefoldin subunit beta family.Curated

Phylogenomic databases

eggNOGiKOG4098. Eukaryota.
ENOG4111S6I. LUCA.
HOGENOMiHOG000211843.
InParanoidiQ9LJ98.
KOiK09549.
OMAiKREYNIR.
OrthoDBiEOG09360R0U.
PhylomeDBiQ9LJ98.

Family and domain databases

Gene3Di1.10.287.370. 1 hit.
InterProiIPR027235. PFD2.
IPR002777. PFD_beta-like.
IPR009053. Prefoldin.
[Graphical view]
PANTHERiPTHR13303. PTHR13303. 1 hit.
PfamiPF01920. Prefoldin_2. 1 hit.
[Graphical view]
SUPFAMiSSF46579. SSF46579. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LJ98-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKSGSGGL REPPNEQAVL NMYEGKRSEL SQIYSNITDL EMQVSEHSLV
60 70 80 90 100
INAIQPLDQS RKCFRMIGGV LVERTIKEVL PAVQRNKDGL EEVVRKLYET
110 120 130 140
LEKKKKDLTE FEAKYKIRIT KQEDNKEGGN KKEGNAQGVL VGAASSSQ
Length:148
Mass (Da):16,526
Last modified:October 1, 2000 - v1
Checksum:i2193233D3BE26475
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000731 Genomic DNA. Translation: BAB01463.1.
CP002686 Genomic DNA. Translation: AEE76644.1.
CP002686 Genomic DNA. Translation: AEE76645.1.
AY113920 mRNA. Translation: AAM44968.1.
AY034920 mRNA. Translation: AAK59427.1.
AY086635 mRNA. Translation: AAM63693.1.
RefSeqiNP_188887.1. NM_113147.4.
NP_850626.1. NM_180295.1.
UniGeneiAt.20076.
At.64534.

Genome annotation databases

EnsemblPlantsiAT3G22480.1; AT3G22480.1; AT3G22480.
AT3G22480.2; AT3G22480.2; AT3G22480.
GeneIDi821819.
GrameneiAT3G22480.1; AT3G22480.1; AT3G22480.
AT3G22480.2; AT3G22480.2; AT3G22480.
KEGGiath:AT3G22480.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000731 Genomic DNA. Translation: BAB01463.1.
CP002686 Genomic DNA. Translation: AEE76644.1.
CP002686 Genomic DNA. Translation: AEE76645.1.
AY113920 mRNA. Translation: AAM44968.1.
AY034920 mRNA. Translation: AAK59427.1.
AY086635 mRNA. Translation: AAM63693.1.
RefSeqiNP_188887.1. NM_113147.4.
NP_850626.1. NM_180295.1.
UniGeneiAt.20076.
At.64534.

3D structure databases

ProteinModelPortaliQ9LJ98.
SMRiQ9LJ98.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT3G22480.1.

PTM databases

iPTMnetiQ9LJ98.

Proteomic databases

PaxDbiQ9LJ98.
PRIDEiQ9LJ98.

Protocols and materials databases

DNASUi821819.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G22480.1; AT3G22480.1; AT3G22480.
AT3G22480.2; AT3G22480.2; AT3G22480.
GeneIDi821819.
GrameneiAT3G22480.1; AT3G22480.1; AT3G22480.
AT3G22480.2; AT3G22480.2; AT3G22480.
KEGGiath:AT3G22480.

Organism-specific databases

TAIRiAT3G22480.

Phylogenomic databases

eggNOGiKOG4098. Eukaryota.
ENOG4111S6I. LUCA.
HOGENOMiHOG000211843.
InParanoidiQ9LJ98.
KOiK09549.
OMAiKREYNIR.
OrthoDBiEOG09360R0U.
PhylomeDBiQ9LJ98.

Miscellaneous databases

PROiQ9LJ98.

Gene expression databases

ExpressionAtlasiQ9LJ98. baseline and differential.
GenevisibleiQ9LJ98. AT.

Family and domain databases

Gene3Di1.10.287.370. 1 hit.
InterProiIPR027235. PFD2.
IPR002777. PFD_beta-like.
IPR009053. Prefoldin.
[Graphical view]
PANTHERiPTHR13303. PTHR13303. 1 hit.
PfamiPF01920. Prefoldin_2. 1 hit.
[Graphical view]
SUPFAMiSSF46579. SSF46579. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPFD2_ARATH
AccessioniPrimary (citable) accession number: Q9LJ98
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 11, 2001
Last sequence update: October 1, 2000
Last modified: November 30, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.