Q9LIN8 (Q9LIN8_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Similarity to alpha galactosidase EMBL BAB02198.1

Gene names

Ordered Locus Names:

At3g26380 TAIR At3g26380

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL BAB02198.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	676 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cell wall Inferred from direct assay. Source: TAIR
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9LIN8 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: AD9FDED2CD48EE3C	FASTA	676	75,511
	10 20 30 40 50 60 MTGLSVEKTG STRSTVFFII FNLSIFSLSI EARSRQQHAS FPPRGWNSYD SFCWTISEAE 70 80 90 100 110 120 FLQSAEIVSK RLLPHGYQYV VVDYLWYRKK VEGAYVDSLG FDVIDEWGRL HPDPGRWPSS 130 140 150 160 170 180 RGGKGFTEVA EKVHRMGLKF GIHVMGGIST QAYNANSLVM DSVKGGAYEE SGRQWRAKDI 190 200 210 220 230 240 GIKERACVWM SHGFMSVNTK LGAGKAFLRS LYRQYAEWGV DFIKHDCVFG TDFNIEEITY 250 260 270 280 290 300 VSEVLKELDR PVLYSISPGT SVTPTMAKEV SQLVNMYRIT GDDWDTWKDV TAHFDISRDL 310 320 330 340 350 360 SASSMIGARG LQGKSWPDLD MLPLGWLTDQ GSNVGPHRAC NLNLEEQKSQ MTLWSIAKSP 370 380 390 400 410 420 LMFGGDVRNL DATTYNLITN PTLLEINSYS SNNKEFPYIT ATRVSRNKHK GYPHHPTGKN 430 440 450 460 470 480 ISTKHAFGLT SCKEQKANTW FIVDKNRGQI CWNQHSSEKL EKPFCLYNRK ALLASDKKLK 490 500 510 520 530 540 HNQLYQGKLH LHTNDKAQSC LAASSQQKLT SKDYSQGALS PCKLDANQMW ELHSNGTLEN 550 560 570 580 590 600 SYSGLCAVLN PVKGLFFSDQ LTSPLFSSTY PFLILGIVTH LAAAEASSNG VRSWIATGRR 610 620 630 640 650 660 GEVYVAFFNL NQEKTKISAK ISDIATALRG KKNLVGASCT SHELWSGKDF GPTKDSVSIQ 670 VEPHGPALFV LHCSNA

References

[1]	"Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones." Nakamura Y. DNA Res. 7:217-221(2000) [PubMed: 10907853] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	Kaneko T., Kato T., Sato S., Nakamura Y., Asamizu E., Tabata S. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP001298 Genomic DNA. Translation: BAB02198.1.
IPI	IPI00538471.
3D structure databases
ProteinModelPortal	Q9LIN8.
SMR	Q9LIN8. Positions 494-550.
ModBase	Search...
Protein family/group databases
CAZy	GH27. Glycoside Hydrolase Family 27.
Proteomic databases
PRIDE	Q9LIN8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GenomeReviews	Gene locus AT3G26380 in contig BA000014_GR.
Organism-specific databases
TAIR	At3g26380.
Phylogenomic databases
eggNOG	KOG2366.
HOGENOM	HBG590530.
InParanoid	Q9LIN8.
PhylomeDB	Q9LIN8.
Gene expression databases
Genevestigator	Q9LIN8.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR013780. Glyco_hydro_13_b. IPR002241. Glyco_hydro_27. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
PRINTS	PR00740. GLHYDRLASE27.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9LIN8_ARATH

Accession

Primary (citable) accession number: Q9LIN8

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	July 27, 2011
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)