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Q9LHH5

- Q9LHH5_ARATH

UniProt

Q9LHH5 - Q9LHH5_ARATH

Protein
Submitted name:

Genomic DNA, chromosome 3, P1 clone: MQC3

Gene

T2E22.34

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 1 (01 Oct 2000)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. circadian rhythm Source: TAIR

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Genomic DNA, chromosome 3, P1 clone: MQC3Imported
    Submitted name:
    Putative uncharacterized protein At3g12320Imported
    Submitted name:
    Putative uncharacterized protein F28J15.9Imported
    Submitted name:
    Putative uncharacterized protein T2E22.34Imported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:T2E22.34Imported
    Synonyms:F28J15.9Imported
    Ordered Locus Names:At3g12320Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 3

    Organism-specific databases

    TAIRiAT3G12320.

    Expressioni

    Gene expression databases

    GenevestigatoriQ9LHH5.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT3G12320.1-P.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG296193.
    HOGENOMiHOG000131657.
    InParanoidiQ9LHH5.
    OMAiSNISNFP.
    PhylomeDBiQ9LHH5.

    Sequencei

    Sequence statusi: Complete.

    Q9LHH5-1 [UniParc]FASTAAdd to Basket

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    MDCYAEELVV PNYQESSSET YPSTGMWGGW SMSSPEAAEK CFDYDGFNGE    50
    GMMYSQMSMR TSEEEEESKR SKAFYGASSL HDFEGIEQMD DMFLSSILED 100
    VPEDDGDVHR ATSSNNSVGS SSMYGGGREV PMFHCHDMSF KEEAPFTISD 150
    LSEENMLDSN YGDELSSEEF VLQDLQRASQ KLTDETRKCF RDTFYRLARS 200
    SQDKSDSVSP NSEELLMQTS RYDYGDGNRF SREEEIESET NSIDRAVANL 250
    TFNKMESNIS NFPLSERVQ 269
    Length:269
    Mass (Da):30,554
    Last modified:October 1, 2000 - v1
    Checksum:i52F0D62365FEEE34
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC069474 Genomic DNA. Translation: AAG51013.1.
    AC069472 Genomic DNA. Translation: AAG51066.1.
    AF360337 mRNA. Translation: AAK28634.1.
    AY051074 mRNA. Translation: AAK93751.1.
    CP002686 Genomic DNA. Translation: AEE75183.1.
    AP002047 Genomic DNA. Translation: BAB03140.1.
    RefSeqiNP_566419.1. NM_112067.3.
    UniGeneiAt.17428.

    Genome annotation databases

    EnsemblPlantsiAT3G12320.1; AT3G12320.1; AT3G12320.
    GeneIDi820411.
    KEGGiath:AT3G12320.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC069474 Genomic DNA. Translation: AAG51013.1 .
    AC069472 Genomic DNA. Translation: AAG51066.1 .
    AF360337 mRNA. Translation: AAK28634.1 .
    AY051074 mRNA. Translation: AAK93751.1 .
    CP002686 Genomic DNA. Translation: AEE75183.1 .
    AP002047 Genomic DNA. Translation: BAB03140.1 .
    RefSeqi NP_566419.1. NM_112067.3.
    UniGenei At.17428.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT3G12320.1-P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT3G12320.1 ; AT3G12320.1 ; AT3G12320 .
    GeneIDi 820411.
    KEGGi ath:AT3G12320.

    Organism-specific databases

    TAIRi AT3G12320.

    Phylogenomic databases

    eggNOGi NOG296193.
    HOGENOMi HOG000131657.
    InParanoidi Q9LHH5.
    OMAi SNISNFP.
    PhylomeDBi Q9LHH5.

    Gene expression databases

    Genevestigatori Q9LHH5.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones."
      Nakamura Y.
      DNA Res. 7:217-221(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    2. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
      European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
      Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
      , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    3. "Arabidopsis thaliana chromosome 3 BAC F28J15 genomic sequence."
      Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
      Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    4. "Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence."
      Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
      Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    5. Cited for: NUCLEOTIDE SEQUENCE.
    6. "Arabidopsis Open Reading Frame (ORF) Clones."
      Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Etgu P., Lee J.M., Toriumi M., Yu G., Brooks S., Chao Q., Chen H., Karlin-Neumann G., Kim C., Lam B., Miranda M., Nguyen M., Palm C.J.
      , Shinn P., Southwick A., Davis R.W., Ecker J.R., Theologis A.
      Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    7. TAIR
      Swarbreck D., Lamesch P., Wilks C., Huala E.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    8. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiQ9LHH5_ARATH
    AccessioniPrimary (citable) accession number: Q9LHH5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2000
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3