SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9LHH5

- Q9LHH5_ARATH

UniProt

Q9LHH5 - Q9LHH5_ARATH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Genomic DNA, chromosome 3, P1 clone: MQC3
Gene
T2E22.34, F28J15.9, At3g12320
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. circadian rhythm Source: TAIR
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Genomic DNA, chromosome 3, P1 clone: MQC3Imported
Submitted name:
Putative uncharacterized protein At3g12320Imported
Submitted name:
Putative uncharacterized protein F28J15.9Imported
Submitted name:
Putative uncharacterized protein T2E22.34Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:T2E22.34Imported
Synonyms:F28J15.9Imported
Ordered Locus Names:At3g12320Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G12320.

Expressioni

Gene expression databases

GenevestigatoriQ9LHH5.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G12320.1-P.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG296193.
HOGENOMiHOG000131657.
InParanoidiQ9LHH5.
OMAiSNISNFP.

Sequencei

Sequence statusi: Complete.

Q9LHH5-1 [UniParc]FASTAAdd to Basket

« Hide

MDCYAEELVV PNYQESSSET YPSTGMWGGW SMSSPEAAEK CFDYDGFNGE    50
GMMYSQMSMR TSEEEEESKR SKAFYGASSL HDFEGIEQMD DMFLSSILED 100
VPEDDGDVHR ATSSNNSVGS SSMYGGGREV PMFHCHDMSF KEEAPFTISD 150
LSEENMLDSN YGDELSSEEF VLQDLQRASQ KLTDETRKCF RDTFYRLARS 200
SQDKSDSVSP NSEELLMQTS RYDYGDGNRF SREEEIESET NSIDRAVANL 250
TFNKMESNIS NFPLSERVQ 269
Length:269
Mass (Da):30,554
Last modified:October 1, 2000 - v1
Checksum:i52F0D62365FEEE34
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC069474 Genomic DNA. Translation: AAG51013.1.
AC069472 Genomic DNA. Translation: AAG51066.1.
AF360337 mRNA. Translation: AAK28634.1.
AY051074 mRNA. Translation: AAK93751.1.
CP002686 Genomic DNA. Translation: AEE75183.1.
AP002047 Genomic DNA. Translation: BAB03140.1.
RefSeqiNP_566419.1. NM_112067.3.
UniGeneiAt.17428.

Genome annotation databases

EnsemblPlantsiAT3G12320.1; AT3G12320.1; AT3G12320.
GeneIDi820411.
KEGGiath:AT3G12320.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC069474 Genomic DNA. Translation: AAG51013.1 .
AC069472 Genomic DNA. Translation: AAG51066.1 .
AF360337 mRNA. Translation: AAK28634.1 .
AY051074 mRNA. Translation: AAK93751.1 .
CP002686 Genomic DNA. Translation: AEE75183.1 .
AP002047 Genomic DNA. Translation: BAB03140.1 .
RefSeqi NP_566419.1. NM_112067.3.
UniGenei At.17428.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT3G12320.1-P.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G12320.1 ; AT3G12320.1 ; AT3G12320 .
GeneIDi 820411.
KEGGi ath:AT3G12320.

Organism-specific databases

TAIRi AT3G12320.

Phylogenomic databases

eggNOGi NOG296193.
HOGENOMi HOG000131657.
InParanoidi Q9LHH5.
OMAi SNISNFP.

Gene expression databases

Genevestigatori Q9LHH5.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones."
    Nakamura Y.
    DNA Res. 7:217-221(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. "Arabidopsis thaliana chromosome 3 BAC F28J15 genomic sequence."
    Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
    Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence."
    Lin X., Kaul S., Town C.D., Benito M., Creasy T.H., Haas B.J., Wu D., Maiti R., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
    Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. Cited for: NUCLEOTIDE SEQUENCE.
  6. "Arabidopsis Open Reading Frame (ORF) Clones."
    Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Etgu P., Lee J.M., Toriumi M., Yu G., Brooks S., Chao Q., Chen H., Karlin-Neumann G., Kim C., Lam B., Miranda M., Nguyen M., Palm C.J.
    , Shinn P., Southwick A., Davis R.W., Ecker J.R., Theologis A.
    Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  7. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  8. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiQ9LHH5_ARATH
AccessioniPrimary (citable) accession number: Q9LHH5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: September 3, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi