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Protein
Submitted name:

At3g12480/MQC3.32

Gene

NF-YC11

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • DNA binding transcription factor activity Source: TAIR
  • protein heterodimerization activity Source: InterPro

Names & Taxonomyi

Protein namesi
Submitted name:
At3g12480/MQC3.32Imported
Submitted name:
Nuclear factor Y, subunit C11Imported
Gene namesi
Name:NF-YC11Imported
Synonyms:''nuclear factor YImported, nuclear factor YImported, subunit C11Imported, subunit C11''Imported
Ordered Locus Names:At3g12480Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G12480
TAIRilocus:2101212 AT3G12480

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiQ9LHG0

Expressioni

Gene expression databases

ExpressionAtlasiQ9LHG0 baseline and differential

Interactioni

Binary interactionsi

Show more details

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ9LHG0, 7 interactors
STRINGi3702.AT3G12480.1

Structurei

3D structure databases

SMRiQ9LHG0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 71CBFD_NFYB_HMFInterPro annotationAdd BLAST64

Phylogenomic databases

eggNOGiKOG1659 Eukaryota
COG5247 LUCA
KOiK21752
OMAiYGHSQGQ
OrthoDBiEOG09360L6U

Family and domain databases

Gene3Di1.10.20.10, 1 hit
InterProiView protein in InterPro
IPR003958 CBFA_NFYB_domain
IPR009072 Histone-fold
PfamiView protein in Pfam
PF00808 CBFD_NFYB_HMF, 1 hit
SUPFAMiSSF47113 SSF47113, 1 hit

Sequencei

Sequence statusi: Complete.

Q9LHG0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKSLE LFLQDLCDRT
60 70 80 90 100
YEITLERGAK TVSSLHLKHC VERYNVFDFL REVVSKVPDY GHSQGQGHGD
110 120 130 140 150
VTMDDRSISK RRKPISDEVN DSDEEYKKSK TQEIGSAKTS GRGGRGRGRG
160 170 180 190 200
RGRGGRAAKA AEREGLNREM EVEAANSGQP PPEDNVKMHA SESSPQEDEK
210 220 230 240 250
KGIDGTAASN EDTKQHLQSP KEGIDFDLNA ESLDLNETKL APATGTTTTT
260 270 280 290
TAATDSEEYS GWPMMDISKM DPAQLASLGK RIDEDEEDYD EEG
Length:293
Mass (Da):32,292
Last modified:October 1, 2000 - v1
Checksum:i29C4A9A775BB43F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF462841 mRNA Translation: AAL58929.1
AY143847 mRNA Translation: AAN28786.1
CP002686 Genomic DNA Translation: AEE75200.1
AP002047 Genomic DNA Translation: BAB03155.1
RefSeqiNP_187854.2, NM_112083.4
UniGeneiAt.16910
At.48650

Genome annotation databases

EnsemblPlantsiAT3G12480.1; AT3G12480.1; AT3G12480
GeneIDi820427
GrameneiAT3G12480.1; AT3G12480.1; AT3G12480
KEGGiath:AT3G12480

Similar proteinsi

Entry informationi

Entry nameiQ9LHG0_ARATH
AccessioniPrimary (citable) accession number: Q9LHG0
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 23, 2018
This is version 142 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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