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Protein

60S acidic ribosomal protein P2-3

Gene

RPP2C

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Plays an important role in the elongation step of protein synthesis.By similarity

GO - Molecular functioni

  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S acidic ribosomal protein P2-3
Gene namesi
Name:RPP2C
Ordered Locus Names:At3g28500
ORF Names:T20D4.1
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G28500
TAIRilocus:2098653 AT3G28500

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002457761 – 11560S acidic ribosomal protein P2-3Add BLAST115

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei104PhosphoserineCombined sources1
Modified residuei105PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ9LH85
PRIDEiQ9LH85

PTM databases

iPTMnetiQ9LH85

Expressioni

Gene expression databases

ExpressionAtlasiQ9LH85 baseline and differential
GenevisibleiQ9LH85 AT

Interactioni

Subunit structurei

P1 and P2 exist as dimers at the large ribosomal subunit.

Protein-protein interaction databases

BioGridi7809, 1 interactor
STRINGi3702.AT3G28500.1

Structurei

3D structure databases

ProteinModelPortaliQ9LH85
SMRiQ9LH85
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3449 Eukaryota
COG2058 LUCA
HOGENOMiHOG000229897
InParanoidiQ9LH85
KOiK02943
OrthoDBiEOG09361069
PhylomeDBiQ9LH85

Family and domain databases

Gene3Di1.10.10.1410, 1 hit
HAMAPiMF_01478 Ribosomal_L12_arch, 1 hit
InterProiView protein in InterPro
IPR038716 P1/P2_N_sf
IPR027534 Ribosomal_L12

Sequencei

Sequence statusi: Complete.

Q9LH85-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVIAAFLLA KLGGNENPTS NDLKKILESV GAEIDETKID LLFSLIKDHD
60 70 80 90 100
VTELIAAGRE KMSALSSGGP AVAMVAGGGG GGAASAAEPV AESKKKVEEV
110
KDESSDDAGM MGLFD
Length:115
Mass (Da):11,735
Last modified:October 1, 2000 - v1
Checksum:i90F28CD3F28AE81A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP002059 Genomic DNA Translation: BAB01952.1
CP002686 Genomic DNA Translation: AEE77453.1
BT003971 mRNA Translation: AAO42015.1
BT005087 mRNA Translation: AAO50620.1
AY086773 mRNA Translation: AAM63824.1
RefSeqiNP_189491.1, NM_113770.3
UniGeneiAt.6781

Genome annotation databases

EnsemblPlantsiAT3G28500.1; AT3G28500.1; AT3G28500
GeneIDi822480
GrameneiAT3G28500.1; AT3G28500.1; AT3G28500
KEGGiath:AT3G28500

Similar proteinsi

Entry informationi

Entry nameiRLA23_ARATH
AccessioniPrimary (citable) accession number: Q9LH85
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 11, 2006
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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