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Q9LFY3 (Q9LFY3_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

T7N9.9 EMBL AAF79853.1

Uncharacterized protein EMBL AEE30770.1
Gene names
Ordered Locus Names:At1g27030 EMBL AEE30770.1 TAIR AT1G27030
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length310 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q9LFY3 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 9A750F16D6520CC5

FASTA31035,521
        10         20         30         40         50         60 
MGSFDLPHSS SFKGESEIFL RNVFENILKT YLRKNPTAKT IWELVQSLDN EKICYDHFTF 

        70         80         90        100        110        120 
RTLKVDGYGI DSLSSFFMAY GYKIGGGLDF PKKKLRVLWF SPPDVHVPND GHGLGNGPLP 

       130        140        150        160        170        180 
RLVIAEVLVD ELSPESQGII RKYLKQEGGK QAVLSSTLGS LIWEKPTWTD FKQLAKESEF 

       190        200        210        220        230        240 
AAWTLIHGYT MNHLAFAVHR FKHRFSDIKF VKQRLEEKGF KLNSDGEILK VSQDGLLFQV 

       250        260        270        280        290        300 
SSISERLPVT FADGVTETIP ASYIEFTQRQ VLPEFKDVPL DEIKEFHRRE AFELDNANHV 

       310 
MESTRFTTKF 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Genomic sequence for Arabidopsis thaliana BAC T7N9 from chromosome I."
Khan S., Brooks S., Buehler E., Chao Q., Johnson-Hopson C., Kim C., Shinn P., Altafi H., Bei Q., Chin C., Chiou J., Choi E., Conn L., Conway A., Gonzales A., Hansen N., Howng B., Koo T. expand/collapse author list , Lam B., Lee J., Lenz C., Li J., Liu A., Liu K., Liu S., Mukharsky N., Nguyen M., Palm C., Pham P., Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M., Vaysberg M., Yu G., Federspiel N.A., Theologis A., Ecker J.R.
Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Cheuk R., Shinn P., Brooks S., Buehler E., Chao Q., Johnson-Hopson C., Khan S., Kim C., Altafi H., Bei B., Chin C., Chiou J., Choi E., Conn L., Conway A., Gonzalez A., Hansen N., Howing B. expand/collapse author list , Koo T., Lam B., Lee J., Lenz C., Li J., Liu A., Liu J., Liu S., Mukharsky N., Nguyen M., Palm C., Pham P., Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M., Vaysberg M., Yu G., Davis R., Federspiel N., Theologis A., Ecker J.
Submitted (SEP-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis cDNA clones."
Kim C.J., Chen H., Cheuk R., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Gibson H.A., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J. expand/collapse author list , Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Arabidopsis ORF clones."
Kim C.J., Chen H., Cheuk R., Shinn P., Banh J., Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. expand/collapse author list , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]TAIR
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[7]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC000348 Genomic DNA. Translation: AAF79853.1.
AY039564 mRNA. Translation: AAK62619.1.
AY113033 mRNA. Translation: AAM47341.1.
CP002684 Genomic DNA. Translation: AEE30770.1.
RefSeqNP_564270.1. NM_102465.2.
UniGeneAt.16263.

3D structure databases

ProteinModelPortalQ9LFY3.
SMRQ9LFY3. Positions 23-269.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ9LFY3. 1 interaction.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G27030.1; AT1G27030.1; AT1G27030.
GeneID839592.
KEGGath:AT1G27030.

Organism-specific databases

TAIRAT1G27030.

Phylogenomic databases

eggNOGNOG09476.
HOGENOMHOG000281323.
InParanoidQ9LFY3.
OMANANHVME.
PhylomeDBQ9LFY3.

Gene expression databases

GenevestigatorQ9LFY3.

Family and domain databases

InterProIPR009770. DUF1338.
[Graphical view]
PfamPF07063. DUF1338. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9LFY3_ARATH
AccessionPrimary (citable) accession number: Q9LFY3
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: July 9, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)