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Q9LFT3 (Q9LFT3_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycosyl hydrolase family 81 protein EMBL AED92219.1
Submitted name:
Putative uncharacterized protein F1N13_10 EMBL CAC01786.1
Gene names
Name:F1N13_10 EMBL CAC01786.1
Ordered Locus Names:At5g15870 TAIR At5g15870
ORF Names:AT5G15870 EMBL AED92219.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAC01786.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length745 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL AED92219.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processcell wall macromolecule catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionendo-1,3(4)-beta-glucanase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9LFT3 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 7D2F1F8A85F44775

FASTA74582,873
        10         20         30         40         50         60 
MLKKVRRKVK VLITKPFKKP KNRPPSPPPP LPLPPSPSPP PSQQMSSSRQ KNTPFLFPRS 

        70         80         90        100        110        120 
DSSVLPDPSR FFSHDLLSSP LPTNSFFQNF TLNNGDQAEY FHPYIIKPST SSLSISYPSL 

       130        140        150        160        170        180 
SHNSAFIYEA FNADITITGS DGPDPHSRKS HLISSFSDLG VTLDFPSSNL RFFLVRGSPF 

       190        200        210        220        230        240 
ITFSVNSSIT ISTIHAVLSL SGNTSSTKYT VKLNNNQTWL IYASSPINLT KDGVSSINCG 

       250        260        270        280        290        300 
DGFSGIIRIV VLPNPNPYFE TILDGFSCSY PVSGDADFTK PFALEYKWEK RGYGDLLMLA 

       310        320        330        340        350        360 
HPLHLKLLST NDCSITVLDN FKYNSIDGDL VGVIGDSWVL KPDPVSVTWH SIKGVQEDSH 

       370        380        390        400        410        420 
QEIISALIKD VNALDSSAEV TNSSYFYAKL IARAARLALI AEEVCYLDVI PKIRTYLKNM 

       430        440        450        460        470        480 
IEPWLNGSFG PNGFLYDPKW GGVITKLGSR DSGADFGFGI YNDHHYHLGY FVYAIAVLAK 

       490        500        510        520        530        540 
IDPLWGKRYR PQAYTLMADY LTLGKKGAKS NSNYPRLRCF DLFKLHSWAG GLTEFADGRN 

       550        560        570        580        590        600 
QESTSEAVNA YYSAALLGLA YGDTHLVAAA SMVLTLEIHA AKMWWQVKED DAIYPQDFTS 

       610        620        630        640        650        660 
ENRVVGVLWS TKRDSGLWFA PKEWKECRLG IQLLPLLPVS EVLFSDVTFV KQLVNWTMPA 

       670        680        690        700        710        720 
LARDSVGEGW KGFVYALESM YDKDGAMEKI KGLNGFDDGN SLSNLLWWVH SRNNDDDDDY 

       730        740 
EEDDEGGYGG HGGGGKYCSF GHYCH

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]EU Arabidopsis sequencing project
Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]Sato S., Nakamura Y., Kaneko T., Kato T., Asamizu E., Kotani H., Tabata S., Bancroft I., Mewes H.W., Rudd S., Lemcke K., Mayer K.F.X.
Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002688 Genomic DNA. Translation: AED92219.1.
AL391145 Genomic DNA. Translation: CAC01786.1.
IPIIPI00537401.
PIRT51370.
RefSeqNP_197091.1. NM_121592.1.
UniGeneAt.65517.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ9LFT3.

Protein family/group databases

CAZyGH81. Glycoside Hydrolase Family 81.

Proteomic databases

PRIDEQ9LFT3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G15870.1; AT5G15870.1; AT5G15870.
GeneID831444.
GenomeReviewsGene locus AT5G15870 in contig BA000015_GR.
KEGGath:AT5G15870.
NMPDRfig|3702.1.peg.23733.

Organism-specific databases

TAIRAt5g15870.

Phylogenomic databases

eggNOGKOG2254.
GeneTreeEPGT00050000003494.
HOGENOMHBG690061.
InParanoidQ9LFT3.
OMATWHSIKG.
PhylomeDBQ9LFT3.
ProtClustDBCLSN2682174.

Gene expression databases

GenevestigatorQ9LFT3.

Family and domain databases

InterProIPR005200. Glyco_hydro_81.
[Graphical view]
PfamPF03639. Glyco_hydro_81. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9LFT3_ARATH
AccessionPrimary (citable) accession number: Q9LFT3
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info