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Protein

Vesicle-associated membrane protein 713

Gene

VAMP713

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in the targeting and/or fusion of transport vesicles to their target membrane.1 Publication

GO - Molecular functioni

GO - Biological processi

  • exocytosis Source: GO_Central
  • protein transport Source: UniProtKB-KW
  • response to salt stress Source: TAIR
  • vesicle fusion Source: GO_Central
Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

ReactomeiR-ATH-8856825. Cargo recognition for clathrin-mediated endocytosis.

Names & Taxonomyi

Protein namesi
Recommended name:
Vesicle-associated membrane protein 7131 Publication
Short name:
AtVAMP7131 Publication
Gene namesi
Name:VAMP7131 Publication
Ordered Locus Names:At5g11150Imported
ORF Names:F2I11.40Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G11150.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini2 – 190CytoplasmicSequence analysisAdd BLAST189
Transmembranei191 – 211Helical; Anchor for type IV membrane proteinSequence analysisAdd BLAST21
Topological domaini212 – 221VesicularSequence analysis10

GO - Cellular componenti

  • Golgi apparatus Source: TAIR
  • integral component of membrane Source: UniProtKB-KW
  • late endosome membrane Source: UniProtKB-SubCell
  • SNARE complex Source: GO_Central
  • vacuolar membrane Source: TAIR
  • vacuole Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Membrane, Vacuole

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00002067522 – 221Vesicle-associated membrane protein 713Add BLAST220

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9LFP1.

Expressioni

Tissue specificityi

Highly expressed in stems and roots. Detected in flowers and leaves.1 Publication

Gene expression databases

GenevisibleiQ9LFP1. AT.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi16262. 1 interactor.
IntActiQ9LFP1. 1 interactor.
STRINGi3702.AT5G11150.1.

Structurei

3D structure databases

ProteinModelPortaliQ9LFP1.
SMRiQ9LFP1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 112LonginPROSITE-ProRule annotationAdd BLAST106
Domaini127 – 187v-SNARE coiled-coil homologyPROSITE-ProRule annotationAdd BLAST61

Domaini

The longin domain is critical for the vacuolar localization.1 Publication

Sequence similaritiesi

Belongs to the synaptobrevin family.Curated
Contains 1 longin domain.PROSITE-ProRule annotation
Contains 1 v-SNARE coiled-coil homology domain.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0859. Eukaryota.
COG5143. LUCA.
HOGENOMiHOG000042711.
InParanoidiQ9LFP1.
KOiK08515.
OMAiAMAFVCH.
OrthoDBiEOG09360NL1.
PhylomeDBiQ9LFP1.

Family and domain databases

Gene3Di1.10.3840.10. 1 hit.
3.30.450.50. 1 hit.
InterProiIPR011012. Longin-like_dom.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
[Graphical view]
PfamiPF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
[Graphical view]
PRINTSiPR00219. SYNAPTOBREVN.
SMARTiSM01270. Longin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS50859. LONGIN. 1 hit.
PS00417. SYNAPTOBREVIN. 1 hit.
PS50892. V_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9LFP1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIIFALVAR GTVVLSEFSA TSTNASSISK QILEKLPGND SDSHMSYSQD
60 70 80 90 100
RYIFHVKRTD GLTVLCMADE TAGRNIPFAF LDDIHQRFVK TYGRAIHSAQ
110 120 130 140 150
AYSMNDEFSR VLSQQMEFYS NDPNADRMSR IKGEMSQVRN VMIENIDKVL
160 170 180 190 200
DRGERLELLV DKTENMQGNT FRFRKQARRY RTIMWWRNVK LTIALILVLA
210 220
LVVYIAMAFV CHGPSLPSCF K
Length:221
Mass (Da):25,320
Last modified:October 1, 2000 - v1
Checksum:i09E54407A67A5A3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL360314 Genomic DNA. Translation: CAB96650.1.
CP002688 Genomic DNA. Translation: AED91639.1.
AY091002 mRNA. Translation: AAM14024.1.
AY122934 mRNA. Translation: AAM67467.1.
RefSeqiNP_196676.1. NM_121153.5.
UniGeneiAt.5977.

Genome annotation databases

EnsemblPlantsiAT5G11150.1; AT5G11150.1; AT5G11150.
GeneIDi830984.
GrameneiAT5G11150.1; AT5G11150.1; AT5G11150.
KEGGiath:AT5G11150.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL360314 Genomic DNA. Translation: CAB96650.1.
CP002688 Genomic DNA. Translation: AED91639.1.
AY091002 mRNA. Translation: AAM14024.1.
AY122934 mRNA. Translation: AAM67467.1.
RefSeqiNP_196676.1. NM_121153.5.
UniGeneiAt.5977.

3D structure databases

ProteinModelPortaliQ9LFP1.
SMRiQ9LFP1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi16262. 1 interactor.
IntActiQ9LFP1. 1 interactor.
STRINGi3702.AT5G11150.1.

Proteomic databases

PaxDbiQ9LFP1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G11150.1; AT5G11150.1; AT5G11150.
GeneIDi830984.
GrameneiAT5G11150.1; AT5G11150.1; AT5G11150.
KEGGiath:AT5G11150.

Organism-specific databases

TAIRiAT5G11150.

Phylogenomic databases

eggNOGiKOG0859. Eukaryota.
COG5143. LUCA.
HOGENOMiHOG000042711.
InParanoidiQ9LFP1.
KOiK08515.
OMAiAMAFVCH.
OrthoDBiEOG09360NL1.
PhylomeDBiQ9LFP1.

Enzyme and pathway databases

ReactomeiR-ATH-8856825. Cargo recognition for clathrin-mediated endocytosis.

Miscellaneous databases

PROiQ9LFP1.

Gene expression databases

GenevisibleiQ9LFP1. AT.

Family and domain databases

Gene3Di1.10.3840.10. 1 hit.
3.30.450.50. 1 hit.
InterProiIPR011012. Longin-like_dom.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
[Graphical view]
PfamiPF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
[Graphical view]
PRINTSiPR00219. SYNAPTOBREVN.
SMARTiSM01270. Longin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS50859. LONGIN. 1 hit.
PS00417. SYNAPTOBREVIN. 1 hit.
PS50892. V_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiVA713_ARATH
AccessioniPrimary (citable) accession number: Q9LFP1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 17, 2003
Last sequence update: October 1, 2000
Last modified: November 30, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.