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Q9LFL2 (Q9LFL2_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Exostosin family protein EMBL AED92355.1
Submitted name:
Putative uncharacterized protein At5g16890 EMBL AAL07088.1
Submitted name:
Putative uncharacterized protein F2K13_40 EMBL CAC01702.1
Gene names
Name:F2K13_40 EMBL CAC01702.1
Ordered Locus Names:At5g16890 TAIR At5g16890
ORF Names:AT5G16890 EMBL AED92355.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAC01702.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9LFL2 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 8275EF2F19CE2452

FASTA51158,081
        10         20         30         40         50         60 
MSGKQQNHRS TSSRPRSKTL ILIGSLFTVS LLVILYTSSS SSRASISNPN PSDRPETSFV 

        70         80         90        100        110        120 
TSLEHFLIYK APKLSLPVRD DTVRGESDDD VRKLDEMVFE RENRWLNEDP GYPVEFPIKV 

       130        140        150        160        170        180 
YVYEMPKKFT FDLLWLFHNT YKETSNATSN GSPVHRLIEQ HSIDYWLWAD LISPESERRL 

       190        200        210        220        230        240 
KSVVRVQKQQ DADFFYVPFF TTISFFLLEK QQCKALYREA LKWVTDQPAW KRSEGRDHIF 

       250        260        270        280        290        300 
PIHHPWSFKS VRKFVKNAIW LLPDMDSTGN WYKPGQVSLE KDLILPYVPN VDICDTKCLS 

       310        320        330        340        350        360 
ESAPMRTTLL FFRGRLKRNA GGKIRAKLGA ELSGIKDIII SEGTAGEGGK LAAQRGMRRS 

       370        380        390        400        410        420 
LFCLCPAGDT PSSARLFDAI VSGCIPVIVS DELEFPFEGI LDYKKVAVLV SSSDAIQPGW 

       430        440        450        460        470        480 
LVNHLRSLTP FQVKGLQNNL AQYSRHFLYS SPAQPLGPED LTWRMIAGKL VNIKLHTRRS 

       490        500        510 
QRVVKGSRSI CRCDCWRSNS TASNSLSSLL S

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., Lee J.M., Quach H.L., Tang C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R. expand/collapse author list , Hayashizaki Y., Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis Full Length cDNA Clones."
Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. expand/collapse author list , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[5]EU Arabidopsis sequencing project
Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]Sato S., Nakamura Y., Kaneko T., Kato T., Asamizu E., Kotani H., Tabata S., Mewes H.W., Rudd S., Lemcke K., Mayer K.F.X.
Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY056239 mRNA. Translation: AAL07088.1.
AY142556 mRNA. Translation: AAN13125.1.
CP002688 Genomic DNA. Translation: AED92355.1.
AL391141 Genomic DNA. Translation: CAC01702.1.
IPIIPI00532136.
PIRT51544.
RefSeqNP_197191.1. NM_121695.1.
UniGeneAt.26353.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT47. Glycosyltransferase Family 47.

Proteomic databases

PRIDEQ9LFL2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G16890.1; AT5G16890.1; AT5G16890.
GeneID831552.
GenomeReviewsGene locus AT5G16890 in contig BA000015_GR.
KEGGath:AT5G16890.
NMPDRfig|3702.1.peg.23851.

Organism-specific databases

TAIRAt5g16890.

Phylogenomic databases

eggNOGKOG1021.
GeneTreeEPGT00070000031305.
HOGENOMHBG320039.
InParanoidQ9LFL2.
OMAYREALKW.
PhylomeDBQ9LFL2.
ProtClustDBCLSN2686306.

Gene expression databases

GenevestigatorQ9LFL2.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9LFL2_ARATH
AccessionPrimary (citable) accession number: Q9LFL2
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info