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Protein

Cellulose synthase-like protein D2

Gene

CSLD2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei422Sequence analysis1
Active sitei848Sequence analysis1

GO - Molecular functioni

  • cellulose synthase (UDP-forming) activity Source: InterPro
  • mannan synthase activity Source: TAIR

GO - Biological processi

  • cellulose biosynthetic process Source: InterPro
  • cell wall organization Source: UniProtKB-KW
  • plant-type cell wall organization or biogenesis Source: GO_Central
  • response to cold Source: TAIR
  • root hair elongation Source: TAIR

Keywordsi

Molecular functionGlycosyltransferase, Transferase
Biological processCell wall biogenesis/degradation

Enzyme and pathway databases

BioCyciARA:AT5G16910-MONOMER

Protein family/group databases

CAZyiGT2 Glycosyltransferase Family 2
TCDBi4.D.3.1.9 the glycan glucosyl transferase (opgh) family

Names & Taxonomyi

Protein namesi
Recommended name:
Cellulose synthase-like protein D2 (EC:2.4.1.-)
Short name:
AtCslD2
Gene namesi
Name:CSLD2
Ordered Locus Names:At5g16910
ORF Names:F2K13.60
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G16910
TAIRilocus:2148171 AT5G16910

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei291 – 311HelicalSequence analysisAdd BLAST21
Transmembranei322 – 342HelicalSequence analysisAdd BLAST21
Transmembranei930 – 950HelicalSequence analysisAdd BLAST21
Transmembranei956 – 976HelicalSequence analysisAdd BLAST21
Transmembranei1002 – 1022HelicalSequence analysisAdd BLAST21
Transmembranei1046 – 1066HelicalSequence analysisAdd BLAST21
Transmembranei1079 – 1099HelicalSequence analysisAdd BLAST21
Transmembranei1109 – 1129HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003193471 – 1145Cellulose synthase-like protein D2Add BLAST1145

Proteomic databases

PaxDbiQ9LFL0
PRIDEiQ9LFL0

PTM databases

iPTMnetiQ9LFL0

Expressioni

Gene expression databases

ExpressionAtlasiQ9LFL0 baseline and differential
GenevisibleiQ9LFL0 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G16910.1

Structurei

3D structure databases

ProteinModelPortaliQ9LFL0
SMRiQ9LFL0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IEH4 Eukaryota
COG1215 LUCA
HOGENOMiHOG000241941
InParanoidiQ9LFL0
KOiK20924
OMAiSDHAKGD
OrthoDBiEOG093600LG
PhylomeDBiQ9LFL0

Family and domain databases

Gene3Di3.30.40.10, 1 hit
3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR005150 Cellulose_synth
IPR029044 Nucleotide-diphossugar_trans
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF03552 Cellulose_synt, 1 hit
SUPFAMiSSF53448 SSF53448, 3 hits

Sequencei

Sequence statusi: Complete.

Q9LFL0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASNKHFDKS RSNLSNNSDI QEPGRPPAGH SVKFAQRTSS GRYINYSRDD
60 70 80 90 100
LDSELGGQDF MSYTVHIPPT PDNQPMDPSI SQKVEEQYVA NSMFTGGFKS
110 120 130 140 150
NTRAHLMHKV IETEPNHPQM AGSKGSSCAI PGCDAKVMSD ERGQDLLPCE
160 170 180 190 200
CDFKICRDCF IDAVKTGGGI CPGCKEPYKN THLTDQVDEN GQQRPMLPGG
210 220 230 240 250
GGSKMERRLS MVKSTNKSAL MRSQTGDFDH NRWLFETTGT YGYGNAFWTK
260 270 280 290 300
DGDFGSGKDG DGDGDGMGME AQDLMSRPWR PLTRKLKIPA GVISPYRLLI
310 320 330 340 350
FIRIVVLALF LTWRVKHQNP DAVWLWGMSV VCELWFALSW LLDQLPKLCP
360 370 380 390 400
INRATDLQVL KEKFETPTAS NPTGKSDLPG FDVFVSTADP EKEPPLVTAN
410 420 430 440 450
TILSILAAEY PVEKLSCYVS DDGGALLTFE AMAEAASFAN IWVPFCRKHA
460 470 480 490 500
IEPRNPDSYF SLKRDPYKNK VKSDFVKDRR RVKREFDEFK VRVNSLPDSI
510 520 530 540 550
RRRSDAYHAR EEIKAMKMQR QNRDDEPMEP VKIPKATWMA DGTHWPGTWL
560 570 580 590 600
TSASDHAKGD HAGIIQVMLK PPSDEPLHGV SEGFLDLTDV DIRLPLLVYV
610 620 630 640 650
SREKRPGYDH NKKAGAMNAL VRASAIMSNG PFILNLDCDH YIYNSEALRE
660 670 680 690 700
GMCFMMDRGG DRLCYVQFPQ RFEGIDPSDR YANHNTVFFD VNMRALDGLM
710 720 730 740 750
GPVYVGTGCL FRRIALYGFN PPRSKDFSPS CWSCCFPRSK KKNIPEENRA
760 770 780 790 800
LRMSDYDDEE MNLSLVPKKF GNSTFLIDSI PVAEFQGRPL ADHPAVKNGR
810 820 830 840 850
PPGALTIPRE LLDASTVAEA IAVISCWYED KTEWGSRIGW IYGSVTEDVV
860 870 880 890 900
TGYRMHNRGW KSVYCVTKRD AFRGTAPINL TDRLHQVLRW ATGSVEIFFS
910 920 930 940 950
RNNALLASSK MKILQRIAYL NVGIYPFTSI FLIVYCFLPA LSLFSGQFIV
960 970 980 990 1000
QTLNVTFLVY LLIISITLCL LALLEIKWSG ISLEEWWRNE QFWLIGGTSA
1010 1020 1030 1040 1050
HLAAVLQGLL KVVAGVEISF TLTSKSGGDD IDDEFADLYM VKWTSLMIPP
1060 1070 1080 1090 1100
ITIIMVNLIA IAVGFSRTIY SVVPQWSKLI GGVFFSFWVL AHLYPFAKGL
1110 1120 1130 1140
MGRRGRTPTI VYVWSGLVAI TISLLWVAIN PPAGNTEIGG NFSFP
Length:1,145
Mass (Da):128,360
Last modified:October 1, 2000 - v1
Checksum:i21A37FD050DC26BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL391141 Genomic DNA Translation: CAC01704.1
CP002688 Genomic DNA Translation: AED92357.1
PIRiT51546
RefSeqiNP_001318575.1, NM_001343473.1
UniGeneiAt.20318

Genome annotation databases

EnsemblPlantsiAT5G16910.1; AT5G16910.1; AT5G16910
GeneIDi831554
GrameneiAT5G16910.1; AT5G16910.1; AT5G16910
KEGGiath:AT5G16910

Similar proteinsi

Entry informationi

Entry nameiCSLD2_ARATH
AccessioniPrimary (citable) accession number: Q9LFL0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health