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Protein

ABC transporter G family member 37

Gene

ABCG37

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May be a general defense protein.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi207 – 214ATP 1PROSITE-ProRule annotation8
Nucleotide bindingi895 – 902ATP 2PROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

  • auxin polar transport Source: TAIR
  • cellular response to indolebutyric acid stimulus Source: TAIR
  • drug transmembrane transport Source: TAIR
  • root development Source: TAIR
  • transmembrane transport Source: TAIR

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter G family member 37
Short name:
ABC transporter ABCG.37
Short name:
AtABCG37
Alternative name(s):
Pleiotropic drug resistance protein 9
Gene namesi
Name:ABCG37
Synonyms:PDR12, PDR9
Ordered Locus Names:At3g53480
ORF Names:F4P12.180
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G53480
TAIRilocus:2084081 AT3G53480

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei544 – 564HelicalSequence analysisAdd BLAST21
Transmembranei581 – 601HelicalSequence analysisAdd BLAST21
Transmembranei615 – 635HelicalSequence analysisAdd BLAST21
Transmembranei661 – 681HelicalSequence analysisAdd BLAST21
Transmembranei687 – 707HelicalSequence analysisAdd BLAST21
Transmembranei773 – 793HelicalSequence analysisAdd BLAST21
Transmembranei1194 – 1214HelicalSequence analysisAdd BLAST21
Transmembranei1226 – 1246HelicalSequence analysisAdd BLAST21
Transmembranei1282 – 1302HelicalSequence analysisAdd BLAST21
Transmembranei1313 – 1333HelicalSequence analysisAdd BLAST21
Transmembranei1339 – 1359HelicalSequence analysisAdd BLAST21
Transmembranei1365 – 1385HelicalSequence analysisAdd BLAST21
Transmembranei1422 – 1442HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002346361 – 1450ABC transporter G family member 37Add BLAST1450

Proteomic databases

PaxDbiQ9LFH0
PRIDEiQ9LFH0

PTM databases

iPTMnetiQ9LFH0

Expressioni

Tissue specificityi

Expressed in roots and, to a lower extent, in seedlings.1 Publication

Inductioni

Induced by cycloheximide (CHX) and cold/dark treatment.1 Publication

Gene expression databases

ExpressionAtlasiQ9LFH0 baseline and differential
GenevisibleiQ9LFH0 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G53480.1

Structurei

3D structure databases

ProteinModelPortaliQ9LFH0
SMRiQ9LFH0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 447ABC transporter 1PROSITE-ProRule annotationAdd BLAST273
Domaini525 – 737ABC transmembrane type-2 1Add BLAST213
Domaini850 – 1103ABC transporter 2PROSITE-ProRule annotationAdd BLAST254
Domaini1175 – 1389ABC transmembrane type-2 2Add BLAST215

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0065 Eukaryota
COG0842 LUCA
HOGENOMiHOG000238051
InParanoidiQ9LFH0
OMAiFTGINNS
OrthoDBiEOG093600JZ
PhylomeDBiQ9LFH0

Family and domain databases

CDDicd03233 ABCG_PDR_domain1, 1 hit
cd03232 ABCG_PDR_domain2, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR013525 ABC_2_trans
IPR029481 ABC_trans_N
IPR003439 ABC_transporter-like
IPR034001 ABCG_PDR_1
IPR034003 ABCG_PDR_2
IPR027417 P-loop_NTPase
IPR013581 PDR_assoc
PfamiView protein in Pfam
PF01061 ABC2_membrane, 2 hits
PF00005 ABC_tran, 2 hits
PF14510 ABC_trans_N, 1 hit
PF08370 PDR_assoc, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS50893 ABC_TRANSPORTER_2, 2 hits

Sequencei

Sequence statusi: Complete.

Q9LFH0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHMVGADDI ESLRVELAEI GRSIRSSFRR HTSSFRSSSS IYEVENDGDV
60 70 80 90 100
NDHDAEYALQ WAEIERLPTV KRMRSTLLDD GDESMTEKGR RVVDVTKLGA
110 120 130 140 150
VERHLMIEKL IKHIENDNLK LLKKIRRRID RVGMELPTIE VRYESLKVVA
160 170 180 190 200
ECEVVEGKAL PTLWNTAKRV LSELVKLTGA KTHEAKINII NDVNGIIKPG
210 220 230 240 250
RLTLLLGPPS CGKTTLLKAL SGNLENNLKC SGEISYNGHR LDEFVPQKTS
260 270 280 290 300
AYISQYDLHI AEMTVRETVD FSARCQGVGS RTDIMMEVSK REKEKGIIPD
310 320 330 340 350
TEVDAYMKAI SVEGLQRSLQ TDYILKILGL DICAEILIGD VMRRGISGGQ
360 370 380 390 400
KKRLTTAEMI VGPTKALFMD EITNGLDSST AFQIVKSLQQ FAHISSATVL
410 420 430 440 450
VSLLQPAPES YDLFDDIMLM AKGRIVYHGP RGEVLNFFED CGFRCPERKG
460 470 480 490 500
VADFLQEVIS KKDQAQYWWH EDLPYSFVSV EMLSKKFKDL SIGKKIEDTL
510 520 530 540 550
SKPYDRSKSH KDALSFSVYS LPNWELFIAC ISREYLLMKR NYFVYIFKTA
560 570 580 590 600
QLVMAAFITM TVFIRTRMGI DIIHGNSYMS ALFFALIILL VDGFPELSMT
610 620 630 640 650
AQRLAVFYKQ KQLCFYPAWA YAIPATVLKV PLSFFESLVW TCLSYYVIGY
660 670 680 690 700
TPEASRFFKQ FILLFAVHFT SISMFRCLAA IFQTVVASIT AGSFGILFTF
710 720 730 740 750
VFAGFVIPPP SMPAWLKWGF WANPLSYGEI GLSVNEFLAP RWNQMQPNNF
760 770 780 790 800
TLGRTILQTR GMDYNGYMYW VSLCALLGFT VLFNIIFTLA LTFLKSPTSS
810 820 830 840 850
RAMISQDKLS ELQGTEKSTE DSSVRKKTTD SPVKTEEEDK MVLPFKPLTV
860 870 880 890 900
TFQDLNYFVD MPVEMRDQGY DQKKLQLLSD ITGAFRPGIL TALMGVSGAG
910 920 930 940 950
KTTLLDVLAG RKTSGYIEGD IRISGFPKVQ ETFARVSGYC EQTDIHSPNI
960 970 980 990 1000
TVEESVIYSA WLRLAPEIDA TTKTKFVKQV LETIELDEIK DSLVGVTGVS
1010 1020 1030 1040 1050
GLSTEQRKRL TIAVELVANP SIIFMDEPTT GLDARAAAIV MRAVKNVADT
1060 1070 1080 1090 1100
GRTIVCTIHQ PSIDIFEAFD ELVLLKRGGR MIYTGPLGQH SRHIIEYFES
1110 1120 1130 1140 1150
VPEIPKIKDN HNPATWMLDV SSQSVEIELG VDFAKIYHDS ALYKRNSELV
1160 1170 1180 1190 1200
KQLSQPDSGS SDIQFKRTFA QSWWGQFKSI LWKMNLSYWR SPSYNLMRMM
1210 1220 1230 1240 1250
HTLVSSLIFG ALFWKQGQNL DTQQSMFTVF GAIYGLVLFL GINNCASALQ
1260 1270 1280 1290 1300
YFETERNVMY RERFAGMYSA TAYALGQVVT EIPYIFIQAA EFVIVTYPMI
1310 1320 1330 1340 1350
GFYPSAYKVF WSLYSMFCSL LTFNYLAMFL VSITPNFMVA AILQSLFYVG
1360 1370 1380 1390 1400
FNLFSGFLIP QTQVPGWWIW LYYLTPTSWT LNGFISSQYG DIHEEINVFG
1410 1420 1430 1440 1450
QSTTVARFLK DYFGFHHDLL AVTAVVQIAF PIALASMFAF FVGKLNFQRR
Length:1,450
Mass (Da):164,106
Last modified:October 1, 2000 - v1
Checksum:iF8F184B24ADC3A1A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL132966 Genomic DNA Translation: CAB67655.1
CP002686 Genomic DNA Translation: AEE79095.1
BK001008 Genomic DNA Translation: DAA00877.1
PIRiT45888
RefSeqiNP_190916.1, NM_115208.4
UniGeneiAt.10013

Genome annotation databases

EnsemblPlantsiAT3G53480.1; AT3G53480.1; AT3G53480
GeneIDi824516
GrameneiAT3G53480.1; AT3G53480.1; AT3G53480
KEGGiath:AT3G53480

Similar proteinsi

Entry informationi

Entry nameiAB37G_ARATH
AccessioniPrimary (citable) accession number: Q9LFH0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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