Unreviewed, UniProtKB/TrEMBL Q9LF98 (Q9LF98_ARATH)

Names and origin

Protein names

Recommended name:
    Fructose-bisphosphate aldolase RuleBase RU003994V0
    EC=4.1.2.13

Gene names

Name:	F8J2_100 EMBL CAB86897.1
Synonyms:	AT3G52930 EMBL BAH20051.1
Ordered Locus Names:	At3g52930 TAIR At3g52930

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Catalytic activity	D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate. RuleBase RU003994V0
Sequence similarities	Belongs to the class I fructose-bisphosphate aldolase family. RuleBase RU003994V0

Ontologies

Keywords
Biological process	Glycolysis RuleBase RU003994V0
Molecular function	Lyase RuleBase RU003994V0
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycolysis Inferred from electronic annotation. Source: InterPro response to cadmium ion Inferred from expression pattern. Source: TAIR response to salt stress Inferred from expression pattern. Source: TAIR
Cellular component	apoplast Inferred from direct assay. Source: TAIR cell wall Inferred from direct assay. Source: TAIR chloroplast Inferred from direct assay. Source: TAIR mitochondrial envelope Inferred from direct assay. Source: TAIR nucleolus Inferred from direct assay. Source: TAIR plasma membrane Inferred from direct assay. Source: TAIR
Molecular function	fructose-bisphosphate aldolase activity Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9LF98-1 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 0E25995B2EE0A319	FASTA	358	38,540
	10 20 30 40 50 60 MSAFTSKFAD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVET NRRNLRELLF 70 80 90 100 110 120 TAPGALPCLS GVILFEETLY QKSSDGKLFV DILKEGGVLP GIKVDKGTVE LAGTDGETTT 130 140 150 160 170 180 QGLDGLGDRC KKYYEAGARF AKWRAVLKIG ENEPSEHSIH ENAYGLARYA VICQENGLVP 190 200 210 220 230 240 IVEPEILVDG SHDIQKCAAV TERVLAACYK ALSDHHVLLE GTLLKPNMVT PGSDSPKVSP 250 260 270 280 290 300 EVIAEHTVRA LQRTVPAAVP AIVFLSGGQS EEEATRNLNA MNQLKTKKPW SLSFSFGRAL 310 320 330 340 350 QQSTLKTWAG KEENVKAAQE ALYVRCKANS EATLGTYKGD AKLGDGAAES LHVKDYKY

References

[1]	Nyakatura G., Fartmann B., Dauner D., Sterr W., Holland R., Weichselgartner M., Mewes H.W., Rudd S., Lemcke K., Mayer K.F.X., Quetier F., Salanoubat M. Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	EU Arabidopsis sequencing project Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAs." Iida K., Fukami-Kobayashi K., Toyoda A., Sakaki Y., Kobayashi M., Seki M., Shinozaki K. DNA Res. 0:0-0(2009) Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Full-length messenger RNA sequences greatly improve genome annotation." Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L. Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed: 12093376] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Features of Arabidopsis genes and genome discovered using full-length cDNAs." Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A. Plant Mol. Biol. 60:71-87(2006) Cited for: NUCLEOTIDE SEQUENCE.
[6]	Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[7]	"Arabidopsis ORF clones." Kim C.J., Chen H., Cheuk R., Meyers M.C., Banh J., Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[8]	"Arabidopsis cDNA clones." Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. , Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[9]	"Arabidopsis cDNA clones." Shinn P., Chen H., Cheuk R., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J. , Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AY052709 mRNA. Translation: AAK96613.1. AY057656 mRNA. Translation: AAL15287.1. AY063718 mRNA. Translation: AAL36068.1. AY087346 mRNA. Translation: AAM64896.1. AK317380 mRNA. Translation: BAH20051.1. AL132969 Genomic DNA. Translation: CAB86897.1.
IPI	IPI00517861.
PIR	T47550.
RefSeq	NP_190861.1.
UniGene	At.25299 At.71433 At.72712
3D structure databases
HSSP	HSSP built from PDB template 6ALD based on UniProtKB P00883.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9LF98. 1 interaction.
Proteomic databases
PRIDE	Q9LF98.
ProMEX	Q9LF98.
Genome annotation databases
GeneID	824459.
KEGG	ath:AT3G52930.
NMPDR	fig|3702.1.peg.16567.
Organism-specific databases
TAIR	At3g52930.
Phylogenomic databases
OMA	Q9LF98. SIHENAY.
Family and domain databases
InterPro	IPR000741. Aldolase_I. IPR013785. Aldolase_TIM. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PANTHER	PTHR11627. Aldolase_I. 1 hit.
Pfam	PF00274. Glycolytic. 1 hit. [Graphical view]
ProDom	PD001128. Aldolase_I. 1 hit. [Graphical view] [Entries sharing at least one domain]
PROSITE	PS00158. ALDOLASE_CLASS_I. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9LF98_ARATH

Accession

Primary (citable) accession number: Q9LF98

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	June 16, 2009
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)