Q9LF80 (GT3_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative glycosyltransferase 3
Short name=AtGT3
EC=2.4.-.-

Gene names

Name:	GT3
Synonyms:	GTL7
Ordered Locus Names:	At5g07720
ORF Names:	MBK20.18

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	457 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location	Golgi apparatus membrane; Single-pass type II membrane protein Potential.
Sequence similarities	Belongs to the glycosyltransferase 34 family.

Ontologies

Keywords
Cellular component	Golgi apparatus Membrane
Domain	Signal-anchor Transmembrane Transmembrane helix
Molecular function	Glycosyltransferase Transferase
PTM	Glycoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	Golgi membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 457	457	Putative glycosyltransferase 3		PRO_0000215171
Regions
	Topological domain	1 – 51	51	Cytoplasmic Potential
	Transmembrane	52 – 71	20	Helical; Signal-anchor for type II membrane protein; Potential
	Topological domain	72 – 457	386	Lumenal Potential
Amino acid modifications
	Glycosylation	115	1	N-linked (GlcNAc...) Potential
	Glycosylation	431	1	N-linked (GlcNAc...) Potential

Sequences

	Sequence		Length	Mass (Da)
	Q9LF80 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 20C09D09C77B0132	FASTA	457	52,367
	10 20 30 40 50 60 MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT 70 80 90 100 110 120 ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD PTDSNEPPDS DLDLNMTYTL 130 140 150 160 170 180 GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID 190 200 210 220 230 240 YCRIHGIEIV YNMAHLDKEL AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP 250 260 270 280 290 300 LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA 310 320 330 340 350 360 GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM 370 380 390 400 410 420 EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME RAFNFADNQV LKLYGFGHRG 430 440 450 LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"A novel Arabidopsis Golgi glycosyltransferase." Mogelsvang S., Dupree P. Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Columbia.
[2]	"Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence features of the regions of 1,456,315 bp covered by nineteen physically assigned P1 and TAC clones." Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N., Tabata S. DNA Res. 5:41-54(1998) [PubMed: 9628582] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[4]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[5]	"An Arabidopsis gene encoding an alpha-xylosyltransferase involved in xyloglucan biosynthesis." Faik A., Price N.J., Raikhel N.V., Keegstra K. Proc. Natl. Acad. Sci. U.S.A. 99:7797-7802(2002) [PubMed: 12032363] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ245573 mRNA. Translation: CAC01676.1. AB010070 Genomic DNA. Translation: BAB11451.1. CP002688 Genomic DNA. Translation: AED91197.1. BT010365 mRNA. Translation: AAQ56808.1.
IPI	IPI00540857.
RefSeq	NP_196389.1. NM_120854.2.
UniGene	At.67209. At.9097.
3D structure databases
ProteinModelPortal	Q9LF80.
SMR	Q9LF80. Positions 149-278.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9LF80.
Protein family/group databases
CAZy	GT34. Glycosyltransferase Family 34.
Proteomic databases
PRIDE	Q9LF80.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G07720.1; AT5G07720.1; AT5G07720.
GeneID	830665.
GenomeReviews	Gene locus AT5G07720 in contig BA000015_GR.
KEGG	ath:AT5G07720.
NMPDR	fig|3702.1.peg.22915.
Organism-specific databases
TAIR	At5g07720.
Phylogenomic databases
GeneTree	EPGT00070000028691.
HOGENOM	HBG319799.
InParanoid	Q9LF80.
OMA	IRNETTF.
PhylomeDB	Q9LF80.
ProtClustDB	PLN03182.
Gene expression databases
ArrayExpress	Q9LF80.
Genevestigator	Q9LF80.
GermOnline	AT5G07720. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR008630. Glyco_trans_34. [Graphical view]
KO	K08238.
Pfam	PF05637. Glyco_transf_34. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GT3_ARATH

Accession

Primary (citable) accession number: Q9LF80

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 26, 2004
Last sequence update:	October 1, 2000
Last modified:	December 14, 2011
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program