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Q9LDA7

- P2C39_ARATH

UniProt

Q9LDA7 - P2C39_ARATH

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Protein
Probable protein phosphatase 2C 39
Gene
At3g15260, K7L4.6
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 magnesium or manganese ions per subunit By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi78 – 781Manganese 1 By similarity
Metal bindingi78 – 781Manganese 2 By similarity
Metal bindingi79 – 791Manganese 1; via carbonyl oxygen By similarity
Metal bindingi240 – 2401Manganese 2 By similarity
Metal bindingi279 – 2791Manganese 2 By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. phosphoprotein phosphatase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Enzyme and pathway databases

BioCyciARA:AT3G15260-MONOMER.
ARA:GQT-1952-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 39 (EC:3.1.3.16)
Short name:
AtPP2C39
Gene namesi
Ordered Locus Names:At3g15260
ORF Names:K7L4.6
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G15260.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 289289Probable protein phosphatase 2C 39
PRO_0000367964Add
BLAST

Proteomic databases

PaxDbiQ9LDA7.
PRIDEiQ9LDA7.

Expressioni

Gene expression databases

GenevestigatoriQ9LDA7.

Interactioni

Protein-protein interaction databases

BioGridi6091. 1 interaction.
IntActiQ9LDA7. 1 interaction.
MINTiMINT-8390618.

Structurei

3D structure databases

ProteinModelPortaliQ9LDA7.
SMRiQ9LDA7. Positions 54-289.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini40 – 281242PP2C-like
Add
BLAST

Sequence similaritiesi

Belongs to the PP2C family.
Contains 1 PP2C-like domain.

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000233896.
InParanoidiQ9LDA7.
OMAiHLSHEIP.
PhylomeDBiQ9LDA7.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LDA7-1 [UniParc]FASTAAdd to Basket

« Hide

MTGREILHKM KESVKEKVGL GASASSADSG KGKSKMLKQI THGFHLVKGK    50
AFHEMEDYVV AKFKEVDDNE LGLFAIFDGH LSHEIPDYLC SHLFENILKE 100
PNFWQEPEKA IKKAYYITDT TILDKADDLG KGGSTAVTAI LINCQKLVVA 150
NVGDSRAVIC QNGVAKPLSV DHEPNMEKDE IENRGGFVSN FPGDVPRVDG 200
QLAVARAFGD KSLKMHLSSE PYVTVEIIDD DAEFLILASD GLWKVMSNQE 250
AVDSIKGIKD AKAAAKHLAE EAVARKSSDD ISVVVVKFQ 289
Length:289
Mass (Da):31,630
Last modified:October 1, 2000 - v1
Checksum:iD37C3DE3BF2F481B
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti55 – 551M → I in AAM53328. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP000413 Genomic DNA. Translation: BAB02155.1.
CP002686 Genomic DNA. Translation: AEE75637.1.
CP002686 Genomic DNA. Translation: AEE75638.1.
AK117480 mRNA. Translation: BAC42144.1.
AY120770 mRNA. Translation: AAM53328.1.
BT008532 mRNA. Translation: AAP40359.1.
RefSeqiNP_188144.1. NM_112389.3.
NP_974318.1. NM_202589.1.
UniGeneiAt.28162.
At.64997.

Genome annotation databases

EnsemblPlantsiAT3G15260.1; AT3G15260.1; AT3G15260.
AT3G15260.2; AT3G15260.2; AT3G15260.
GeneIDi820757.
KEGGiath:AT3G15260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP000413 Genomic DNA. Translation: BAB02155.1 .
CP002686 Genomic DNA. Translation: AEE75637.1 .
CP002686 Genomic DNA. Translation: AEE75638.1 .
AK117480 mRNA. Translation: BAC42144.1 .
AY120770 mRNA. Translation: AAM53328.1 .
BT008532 mRNA. Translation: AAP40359.1 .
RefSeqi NP_188144.1. NM_112389.3.
NP_974318.1. NM_202589.1.
UniGenei At.28162.
At.64997.

3D structure databases

ProteinModelPortali Q9LDA7.
SMRi Q9LDA7. Positions 54-289.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 6091. 1 interaction.
IntActi Q9LDA7. 1 interaction.
MINTi MINT-8390618.

Proteomic databases

PaxDbi Q9LDA7.
PRIDEi Q9LDA7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G15260.1 ; AT3G15260.1 ; AT3G15260 .
AT3G15260.2 ; AT3G15260.2 ; AT3G15260 .
GeneIDi 820757.
KEGGi ath:AT3G15260.

Organism-specific databases

TAIRi AT3G15260.

Phylogenomic databases

eggNOGi COG0631.
HOGENOMi HOG000233896.
InParanoidi Q9LDA7.
OMAi HLSHEIP.
PhylomeDBi Q9LDA7.

Enzyme and pathway databases

BioCyci ARA:AT3G15260-MONOMER.
ARA:GQT-1952-MONOMER.

Gene expression databases

Genevestigatori Q9LDA7.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 1 hit.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones."
    Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.
    DNA Res. 7:217-221(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  5. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C39_ARATH
AccessioniPrimary (citable) accession number: Q9LDA7
Secondary accession number(s): Q8L834
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: October 1, 2000
Last modified: June 11, 2014
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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