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Protein
Submitted name:

CwlV

Gene

cwlV

Organism
Paenibacillus polymyxa (Bacillus polymyxa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi330 – 3301Zinc; via tele nitrogenCombined sources
Metal bindingi346 – 3461ZincCombined sources
Metal bindingi400 – 4001Zinc; via pros nitrogenCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Metal-bindingCombined sources, ZincCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
CwlVImported
Gene namesi
Name:cwlVImported
OrganismiPaenibacillus polymyxa (Bacillus polymyxa)Imported
Taxonomic identifieri1406 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323Sequence analysisAdd
BLAST
Chaini24 – 499476Sequence analysisPRO_5004328946Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi1052684.PPM_2858.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1JWQX-ray1.80A322-499[»]
ProteinModelPortaliQ9LCR3.
SMRiQ9LCR3. Positions 322-499.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9LCR3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini385 – 493109Ami_3InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiCOG0860. LUCA.

Family and domain databases

Gene3Di3.30.457.10. 1 hit.
3.40.630.40. 1 hit.
InterProiIPR021731. AMIN_dom.
IPR012854. Cu_amine_oxidase-like_N.
IPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
PF11741. AMIN. 1 hit.
PF07833. Cu_amine_oxidN1. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]
SUPFAMiSSF55383. SSF55383. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LCR3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKFGFLLLL FVFMWAVPGY GHAASSGTQI YLDDQQLSVP SGAKAQVIGG
60 70 80 90 100
STMVPLRVIS ENLGYDVTWK QQARTITIEK DSTSIRMIIG SKTATVNGSD
110 120 130 140 150
ISLDASPLLR SNYALVPLRF IGEQMGLDVK WDSSSKSVKL YTRSSGSGNG
160 170 180 190 200
EFTPPKSGNN STGTGSVTAP TNNASSGVTQ VQGVSFSQNR LTITTASGVK
210 220 230 240 250
PKAFTMTGPD RVVVDLPATA FADNFGDQQK LDSNLNGSLD IENEADVSGI
260 270 280 290 300
RYALFQKEPS TVRVVIDLKH AMNYTAYNDG SNRVIVDLAS KDSVNTTPDA
310 320 330 340 350
TLPDGSQPDD TQTSPVNSNG KKVVVIDAGH GAKDSGAVGI SRKNYEKTFN
360 370 380 390 400
LAMALKVESI LKQNPKLEVV LTRSDDTFLE LKQRVKVAEN LKANVFVSIH
410 420 430 440 450
ANSSGSSASN GTETYYQRSA SKAFANVMHK YFAPATGLTD RGIRYGNFHV
460 470 480 490
IRETTMPAVL LEVGYLSNAK EEATLFDEDF QNRVAQGIAD GITEYLDVK
Length:499
Mass (Da):53,708
Last modified:October 1, 2000 - v1
Checksum:iC749AB8FEDF54E3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB003153 Genomic DNA. Translation: BAA90649.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB003153 Genomic DNA. Translation: BAA90649.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1JWQX-ray1.80A322-499[»]
ProteinModelPortaliQ9LCR3.
SMRiQ9LCR3. Positions 322-499.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1052684.PPM_2858.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiCOG0860. LUCA.

Miscellaneous databases

EvolutionaryTraceiQ9LCR3.

Family and domain databases

Gene3Di3.30.457.10. 1 hit.
3.40.630.40. 1 hit.
InterProiIPR021731. AMIN_dom.
IPR012854. Cu_amine_oxidase-like_N.
IPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
PF11741. AMIN. 1 hit.
PF07833. Cu_amine_oxidN1. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]
SUPFAMiSSF55383. SSF55383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Cloning and expression of two autolysin genes, cwIU and cwIV, which are tandemly arranged on the chromosome of Bacillus polymyxa var. colistinus."
    Ishikawa S., Kawahara S., Sekiguchi J.
    Mol. Gen. Genet. 262:738-748(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "The Structure of the catalytic domain of N-acetylmuramoyl-L-alanine amidase, a cell wall hydrolase from Bacillus polymyxa var.colistinus and its resemblance to the structure of carboxypeptidases."
    Yamane T., Koyama Y., Nojiri Y., Hikage T., Akita M., Suzuki A., Shirai T., Ise F., Shida T., Sekiguchi J.
    Submitted (SEP-2001) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 322-499 IN COMPLEX WITH ZINC.

Entry informationi

Entry nameiQ9LCR3_PAEPO
AccessioniPrimary (citable) accession number: Q9LCR3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: March 16, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.