Endo-1,3-beta-xylanase - Vibrio sp. XY-214

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Unreviewed, UniProtKB/TrEMBL Q9LCB9 (Q9LCB9_9VIBR)

Last modified June 16, 2009. Version 26. History...

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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Endo-1,3-beta-xylanase EMBL BAA94698.1

Gene names

Name:

txyA EMBL BAA94698.1

Organism

Vibrio sp. XY-214 EMBL BAA94698.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	460 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Biological process	Xylan degradation
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q9LCB9-1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 6EFA748496BA092A
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460

51,324

        10         20         30         40         50         60 
MKKLAKMISV ATLGACAFQA HALDGKLVPD QGILVSVGQD VDSVNDYSSA MGTTPAGVTN 

        70         80         90        100        110        120 
YVGIVNLDGL STDADAGAGR NNIVELANQY PTSALIVGVS MNGEVQNVAN GQYNANIDTL 

       130        140        150        160        170        180 
IRTLGEFDRP VYLRWAYEVD GPWNGHNTED LKQSFRHVYQ RIRELGYADN ISMVWQVASY 

       190        200        210        220        230        240 
CPTAPGQLGT WWPGDDVVDW VGLSYFAPQD CNWDRVNEAA QWARSHNKPL FINESSPQRY 

       250        260        270        280        290        300 
QLADLTYSTD PAKGTNRQAK TDQQIWSEWF EPFFQFMVDN QDILKGFTYI NADWDSQWRW 

       310        320        330        340        350        360 
AAPYNEGYWG DSRVQVIPYI KQKWQETLSD PKFIRHSDEL FAQLGYGNSD GGNGGDNGGD 

       370        380        390        400        410        420 
NGGDNGGETP ENCTDDFNFN YVSDNEIEVY HVDKGWSAGW NYLCLDDYCL SGTKSNGAFS 

       430        440        450        460 
RSFSAQLGQT YKMTFKVEDI TGQGQQIIDK TVTFTNQVCN

References

[1]

"Cloning, sequencing, and expression in Escherichia coli of the new gene encoding beta-1,3-xylanase from a marine bacterium, Vibrio sp. strain XY-214."
Araki T., Hashikawa S., Morishita T.
Appl. Environ. Microbiol. 66:1741-1743(2000) [PubMed: 10742274] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: XY-214 EMBL BAA94698.1.

Cross-references

Sequence databases

AB029043 Genomic DNA. Translation: BAA94698.1.

3D structure databases

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2DDX	X-ray	0.86	A	23-315	[»]

SMR

Q9LCB9. Positions 23-346, 370-460.

ModBase

Protein family/group databases

CAZy

CBM31. Carbohydrate-Binding Module Family 31.
GH26. Glycoside Hydrolase Family 26.

Family and domain databases

InterPro

IPR013781. Glyco_hydro_sg_catalytic.
[Graphical view]

Gene3D

G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

ProtoNet

Entry information

Entry name

Q9LCB9_9VIBR

Accession

Primary (citable) accession number: Q9LCB9

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	June 16, 2009
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information