Q9LBF2 (Q9LBF2_AERPU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-1,4-xylosidase with transcriptional regulator of AraC/XylS family EMBL BAA95685.1

Gene names

Name:

xysA EMBL BAA95685.1

Organism

Aeromonas punctata (Aeromonas caviae) EMBL BAA95685.1

Taxonomic identifier

648 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Aeromonadales › Aeromonadaceae › Aeromonas

Protein attributes

Sequence length	745 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH araC/xylS-type DNA-binding domain. SAAS SAAS018060

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000700 SAAS SAAS018060
Ligand	DNA-binding RuleBase RU000700 SAAS SAAS018060
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9LBF2 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 71B8680A366F27D2	FASTA	745	86,593
	10 20 30 40 50 60 MNNNAFISCN SALNVEQNAP HLQSIKQYLA QMVWEINKKT PGYQNFTMGR LQMLCGCLQR 70 80 90 100 110 120 YFSSGTNSAL EDGSRDYDYK RLNRVLTYID LHYNEKITLQ DMAHSEHLSL HYFSHFFTDK 130 140 150 160 170 180 IGIPFQKYLT LIRLEKAQAQ LAANDKNISE IALDCGFANV KLFNKYFKEK YGCTPGSYRE 190 200 210 220 230 240 ASRTPELHQL NVNRKPKTYE ESSSGDYYEM ETLNAIGSLY RYLDVKVDAV QDTLSVPSAH 250 260 270 280 290 300 LSDQTCIEIR ADQTSSVYEK HWNMTMTAGR AIEGLREDWR KQLSALKGKV PFQNIRFHGI 310 320 330 340 350 360 FNDEMMVYSE NEQDIPLYNW SYVDKLYDFL LDQGVRPFVE LSFMPSQLAR SKETLFWWRG 370 380 390 400 410 420 NISPPSDPAK WQALVGEFVR HCLNRYGAEE VRQWYFEVWN EPDLAGVCWA GSKEEYFTFY 430 440 450 460 470 480 ESTVHAIKSI LPELKVGGPA MGYGSLWNDT WAEEFLSYCR KREVALDFYS FHIYSEYPKL 490 500 510 520 530 540 KVEDDRLTQI MPPAFYKESI ALMRQKMNAS SYGHVELHVT EWNFSLYDRN LLHDTMFMAP 550 560 570 580 590 600 FVIYHTMNTL GDVKAMAFWS FTDVFEESIV PASPFYGGFG LINRDGLNKP SYYAFELMQK 610 620 630 640 650 660 LGDELMVKGD GYVGTRKRDG SMQFLFYHYV HVDQLFASGD WSELSSSTRY DVFEEKGSKA 670 680 690 700 710 720 YELTLSNLEG PYKCTSYQLD REHGSVFDEW TRMGSPYSLT EEEIAYLNGR SGPVMGTEMI 730 740 RDESWHREIL LPPHGVMLLI LDRQY

References

[1]	"Xylosidase gene(xysA) of Aeromonas caviae ME-1." Ito H., Kitagawa E., Suzuki T., Kawai K. Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ME-1 EMBL BAA95685.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB042614 Genomic DNA. Translation: BAA95685.1.
3D structure databases
HSSP	HSSP built from PDB template 1UHV based on UniProtKB P36906.
ProteinModelPortal	Q9LBF2.
ModBase	Search...
Protein family/group databases
CAZy	GH39. Glycoside Hydrolase Family 39.
AraC-XylS	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR000514. Glyco_hydro_39. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR009057. Homeodomain-like. IPR012287. Homeodomain-rel. IPR018062. HTH_AraC-typ_sub_2. IPR018060. HTH_AraC_DNA-bd. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:1.10.10.60. Homeodomain-rel. 2 hits.
Pfam	PF01229. Glyco_hydro_39. 1 hit. [Graphical view]
PRINTS	PR00745. GLHYDRLASE39.
SMART	SM00342. HTH_ARAC. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF46689. Homeodomain_like. 2 hits.
PROSITE	PS01027. GLYCOSYL_HYDROL_F39. 1 hit. PS00041. HTH_ARAC_FAMILY_1. 1 hit. PS01124. HTH_ARAC_FAMILY_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9LBF2_AERPU

Accession

Primary (citable) accession number: Q9LBF2

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	December 14, 2011
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)