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Protein
Submitted name:

Putative transcription regulator

Gene

cprK

Organism
Desulfitobacterium dehalogenans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi180 – 199H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcription regulatorImported
Gene namesi
Name:cprKImported
OrganismiDesulfitobacterium dehalogenansImported
Taxonomic identifieri36854 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfitobacterium

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2H6CX-ray2.90A/B1-232[»]
ProteinModelPortaliQ9LAS2.
SMRiQ9LAS2.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9LAS2.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 87Cyclic nucleotide-bindingInterPro annotationAdd BLAST53
Domaini147 – 220HTH crp-type DNA-bindingInterPro annotationAdd BLAST74

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiView protein in InterPro
IPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF13545. HTH_Crp_2. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiView protein in PROSITE
PS50042. CNMP_BINDING_3. 1 hit.
PS51063. HTH_CRP_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9LAS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAEGLDKDF CGAIIPDSFF PIEKLRNYTD MGIIREFAKG SAIIMPGEDT
60 70 80 90 100
TSMIFLMDGK IKLDIIFEDG SEKLLYYAGS NSLIGRLYPT GNNIYATAME
110 120 130 140 150
QTRTCWFSEE CLRVIFRTDE DMIFEIFKNY LTKVAYYARQ VAEINTYNPT
160 170 180 190 200
IRILRLFYEL CSSQGKRVGD TYEITMPLSQ KSIGEITGAH HVTVSKVLAC
210 220 230
LKKENILDKK KNKFIVYNLE ELKHLSEQTS YY
Length:232
Mass (Da):26,647
Last modified:October 1, 2000 - v1
Checksum:i51576C61666071E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF115542 Genomic DNA. Translation: AAF67815.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF115542 Genomic DNA. Translation: AAF67815.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2H6CX-ray2.90A/B1-232[»]
ProteinModelPortaliQ9LAS2.
SMRiQ9LAS2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ9LAS2.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
2.60.120.10. 1 hit.
InterProiView protein in InterPro
IPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR012318. HTH_CRP.
IPR014710. RmlC-like_jellyroll.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF13545. HTH_Crp_2. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF51206. SSF51206. 1 hit.
PROSITEiView protein in PROSITE
PS50042. CNMP_BINDING_3. 1 hit.
PS51063. HTH_CRP_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9LAS2_9FIRM
AccessioniPrimary (citable) accession number: Q9LAS2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: February 15, 2017
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.