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Protein
Submitted name:

Class III cytochrome C family protein

Gene

cytc3

Organism
Desulfovibrio desulfuricans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi43Iron (heme 1 axial ligand); via tele nitrogenCombined sources1
Metal bindingi46Iron (heme 3 axial ligand); via tele nitrogenCombined sources1
Binding sitei51Heme 1 (covalent)Combined sources1
Binding sitei54Heme 1 (covalent)Combined sources1
Metal bindingi55Iron (heme 1 axial ligand); via tele nitrogenCombined sources1
Metal bindingi56Iron (heme 4 axial ligand); via tele nitrogenCombined sources1
Binding sitei67Heme 4 (covalent)Combined sources1
Binding sitei72Heme 4 (covalent)Combined sources1
Metal bindingi73Iron (heme 4 axial ligand); via tele nitrogenCombined sources1
Metal bindingi90Iron (heme 2 axial ligand); via tele nitrogenCombined sources1
Binding sitei100Heme 3 (covalent)Combined sources1
Binding sitei103Heme 3 (covalent)Combined sources1
Metal bindingi104Iron (heme 3 axial ligand); via tele nitrogenCombined sources1
Binding sitei121Heme 2 (covalent)Combined sources1
Binding sitei126Heme 2 (covalent)Combined sources1
Metal bindingi127Iron (heme 2 axial ligand); via tele nitrogenCombined sources1

GO - Molecular functioni

Keywordsi

LigandHemeCombined sources, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Class III cytochrome C family proteinImported
Submitted name:
Cytochrome c3Imported
Gene namesi
Name:cytc3Imported
ORF Names:SAMN02910291_00073Imported
OrganismiDesulfovibrio desulfuricansImported
Taxonomic identifieri876 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
Proteomesi
  • UP000182680 Componenti: Unassembled WGS sequence

Pathology & Biotechi

Chemistry databases

DrugBankiDB03317. Heme C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_501051080322 – 128Sequence analysisAdd BLAST107

Interactioni

Protein-protein interaction databases

STRINGi525146.Ddes_2013.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GM4X-ray2.05A22-128[»]
1GMBX-ray2.00A22-128[»]
1I77X-ray1.95A22-128[»]
1UP9X-ray1.35A22-128[»]
1UPDX-ray1.40A22-128[»]
3CYRX-ray1.60A22-128[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9L915.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 124Cytochrom_CIIIInterPro annotationAdd BLAST100

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4106BES. Bacteria.
ENOG410XXW1. LUCA.

Family and domain databases

InterProiView protein in InterPro
IPR002322. Cyt_c_III.
IPR020942. Cyt_c_III_dom.
IPR011031. Multihaem_cyt.
PfamiView protein in Pfam
PF02085. Cytochrom_CIII. 1 hit.
PRINTSiPR00609. CYTOCHROMEC3.
SUPFAMiSSF48695. SSF48695. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9L915-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKTLALTCM LALLLAVSAW AAPAVPDKPV EVKGSQKTVM FPHAPHEKVE
60 70 80 90 100
CVTCHHLVDG KESYAKCGSS GCHDDLTAKK GEKSLYYVVH AKGELKHTSC
110 120
LACHSKVVAE KPELKKDLTG CAKSKCHP
Length:128
Mass (Da):13,795
Last modified:March 1, 2001 - v2
Checksum:i5091922B06293FD4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF187324 Genomic DNA. Translation: AAF43894.2.
FPIW01000002 Genomic DNA. Translation: SFW12204.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF187324 Genomic DNA. Translation: AAF43894.2.
FPIW01000002 Genomic DNA. Translation: SFW12204.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GM4X-ray2.05A22-128[»]
1GMBX-ray2.00A22-128[»]
1I77X-ray1.95A22-128[»]
1UP9X-ray1.35A22-128[»]
1UPDX-ray1.40A22-128[»]
3CYRX-ray1.60A22-128[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi525146.Ddes_2013.

Chemistry databases

DrugBankiDB03317. Heme C.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4106BES. Bacteria.
ENOG410XXW1. LUCA.

Miscellaneous databases

EvolutionaryTraceiQ9L915.

Family and domain databases

InterProiView protein in InterPro
IPR002322. Cyt_c_III.
IPR020942. Cyt_c_III_dom.
IPR011031. Multihaem_cyt.
PfamiView protein in Pfam
PF02085. Cytochrom_CIII. 1 hit.
PRINTSiPR00609. CYTOCHROMEC3.
SUPFAMiSSF48695. SSF48695. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9L915_DESDE
AccessioniPrimary (citable) accession number: Q9L915
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: March 1, 2001
Last modified: June 7, 2017
This is version 78 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.