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Protein
Submitted name:

Cytochrome c3

Gene

cytc3

Organism
Desulfovibrio desulfuricans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi43Iron (heme 1 axial ligand); via tele nitrogenCombined sources1
Metal bindingi46Iron (heme 3 axial ligand); via tele nitrogenCombined sources1
Binding sitei51Heme 1 (covalent)Combined sources1
Binding sitei54Heme 1 (covalent)Combined sources1
Metal bindingi55Iron (heme 1 axial ligand); via tele nitrogenCombined sources1
Metal bindingi56Iron (heme 4 axial ligand); via tele nitrogenCombined sources1
Binding sitei67Heme 4 (covalent)Combined sources1
Binding sitei72Heme 4 (covalent)Combined sources1
Metal bindingi73Iron (heme 4 axial ligand); via tele nitrogenCombined sources1
Metal bindingi90Iron (heme 2 axial ligand); via tele nitrogenCombined sources1
Binding sitei100Heme 3 (covalent)Combined sources1
Binding sitei103Heme 3 (covalent)Combined sources1
Metal bindingi104Iron (heme 3 axial ligand); via tele nitrogenCombined sources1
Binding sitei121Heme 2 (covalent)Combined sources1
Binding sitei126Heme 2 (covalent)Combined sources1
Metal bindingi127Iron (heme 2 axial ligand); via tele nitrogenCombined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

HemeCombined sources, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome c3Imported
Gene namesi
Name:cytc3Imported
OrganismiDesulfovibrio desulfuricansImported
Taxonomic identifieri876 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500432873922 – 128Sequence analysisAdd BLAST107

Interactioni

Protein-protein interaction databases

STRINGi525146.Ddes_2013.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GM4X-ray2.05A22-128[»]
1GMBX-ray2.00A22-128[»]
1I77X-ray1.95A22-128[»]
1UP9X-ray1.35A22-128[»]
1UPDX-ray1.40A22-128[»]
3CYRX-ray1.60A22-128[»]
ProteinModelPortaliQ9L915.
SMRiQ9L915.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9L915.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 124Cytochrom_CIIIInterPro annotationAdd BLAST100

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4106BES. Bacteria.
ENOG410XXW1. LUCA.

Family and domain databases

InterProiIPR002322. Cyt_c_III.
IPR020942. Cyt_c_III_dom.
IPR011031. Multihaem_cyt.
[Graphical view]
PfamiPF02085. Cytochrom_CIII. 1 hit.
[Graphical view]
PRINTSiPR00609. CYTOCHROMEC3.
SUPFAMiSSF48695. SSF48695. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9L915-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKTLALTCM LALLLAVSAW AAPAVPDKPV EVKGSQKTVM FPHAPHEKVE
60 70 80 90 100
CVTCHHLVDG KESYAKCGSS GCHDDLTAKK GEKSLYYVVH AKGELKHTSC
110 120
LACHSKVVAE KPELKKDLTG CAKSKCHP
Length:128
Mass (Da):13,795
Last modified:March 1, 2001 - v2
Checksum:i5091922B06293FD4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF187324 Genomic DNA. Translation: AAF43894.2.

Genome annotation databases

PATRICi21738040. VBIDesDes50650_2352.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF187324 Genomic DNA. Translation: AAF43894.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GM4X-ray2.05A22-128[»]
1GMBX-ray2.00A22-128[»]
1I77X-ray1.95A22-128[»]
1UP9X-ray1.35A22-128[»]
1UPDX-ray1.40A22-128[»]
3CYRX-ray1.60A22-128[»]
ProteinModelPortaliQ9L915.
SMRiQ9L915.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi525146.Ddes_2013.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

PATRICi21738040. VBIDesDes50650_2352.

Phylogenomic databases

eggNOGiENOG4106BES. Bacteria.
ENOG410XXW1. LUCA.

Miscellaneous databases

EvolutionaryTraceiQ9L915.

Family and domain databases

InterProiIPR002322. Cyt_c_III.
IPR020942. Cyt_c_III_dom.
IPR011031. Multihaem_cyt.
[Graphical view]
PfamiPF02085. Cytochrom_CIII. 1 hit.
[Graphical view]
PRINTSiPR00609. CYTOCHROMEC3.
SUPFAMiSSF48695. SSF48695. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9L915_DESDE
AccessioniPrimary (citable) accession number: Q9L915
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: March 1, 2001
Last modified: November 2, 2016
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.