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Q9KYI9 (SSB1_STRCO) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Single-stranded DNA-binding protein 1

Short name=SSB 1
Gene names
Name:ssb1
Ordered Locus Names:SCO2683
ORF Names:SCC61A.04c
OrganismStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) [Reference proteome] [HAMAP]
Taxonomic identifier100226 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomycesStreptomyces albidoflavus group

Protein attributes

Sequence length156 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00984

Sequence similarities

Contains 1 SSB domain.

Ontologies

Keywords
   LigandDNA-binding
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processDNA replication

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsingle-stranded DNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 156156Single-stranded DNA-binding protein 1 HAMAP-Rule MF_00984
PRO_0000096115

Regions

Domain1 – 107107SSB

Secondary structure

.............. 156
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q9KYI9 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 3B5710BFD4D7C692

FASTA15616,833
        10         20         30         40         50         60 
MNETMICAVG NVATTPVFRD LANGPSVRFR LAVTARYWDR EKNAWTDGHT NFFTVWANRQ 

        70         80         90        100        110        120 
LATNASGSLA VGDPVVVQGR LKVRTDVREG QSRTSADIDA VAIGHDLARG TAAFRRTART 

       130        140        150 
EASTSPPRPE PNWEVPAGGT PGEPVPEQRP DPVPVG 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL939113 Genomic DNA. Translation: CAB92249.1.
RefSeqNP_626917.1. NC_003888.3.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4DAMX-ray1.70A/B/C/D/E/F/G/H/I/J/K/L1-116[»]
ProteinModelPortalQ9KYI9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING100226.SCO2683.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB92249; CAB92249; CAB92249.
GeneID1098117.
KEGGsco:SCO2683.
PATRIC23735076. VBIStrCoe124346_2739.

Phylogenomic databases

eggNOGCOG0629.
HOGENOMHOG000106485.
KOK03111.
OMAWHPARIN.
OrthoDBEOG6M9F32.
PhylomeDBQ9KYI9.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
HAMAPMF_00984. SSB.
InterProIPR012340. NA-bd_OB-fold.
IPR000424. Primosome_PriB/ssb.
IPR011344. ssDNA-bd.
[Graphical view]
PANTHERPTHR10302. PTHR10302. 1 hit.
PfamPF00436. SSB. 1 hit.
[Graphical view]
PIRSFPIRSF002070. SSB. 1 hit.
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50935. SSB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSSB1_STRCO
AccessionPrimary (citable) accession number: Q9KYI9
Entry history
Integrated into UniProtKB/Swiss-Prot: October 24, 2003
Last sequence update: October 1, 2000
Last modified: May 14, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references