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Protein

Single-stranded DNA-binding protein 1

Gene

ssb1

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Single-stranded DNA-binding protein 1UniRule annotation
Short name:
SSB 1UniRule annotation
Gene namesi
Name:ssb1
Ordered Locus Names:SCO2683
ORF Names:SCC61A.04c
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000961151 – 156Single-stranded DNA-binding protein 1Add BLAST156

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi100226.SCO2683

Structurei

Secondary structure

1156
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi5 – 12Combined sources8
Beta strandi17 – 21Combined sources5
Beta strandi24 – 39Combined sources16
Turni40 – 43Combined sources4
Beta strandi44 – 58Combined sources15
Helixi59 – 68Combined sources10
Beta strandi74 – 88Combined sources15
Beta strandi91 – 105Combined sources15

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4DAMX-ray1.70A/B/C/D/E/F/G/H/I/J/K/L1-116[»]
ProteinModelPortaliQ9KYI9
SMRiQ9KYI9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 107SSBUniRule annotationAdd BLAST107

Phylogenomic databases

eggNOGiENOG4105VHU Bacteria
COG0629 LUCA
HOGENOMiHOG000106485
InParanoidiQ9KYI9
KOiK03111
OMAiFTVWANR
OrthoDBiPOG091H00DP
PhylomeDBiQ9KYI9

Family and domain databases

CDDicd04496 SSB_OBF, 1 hit
HAMAPiMF_00984 SSB, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000424 Primosome_PriB/ssb
IPR011344 ssDNA-bd
PANTHERiPTHR10302 PTHR10302, 1 hit
PTHR10302:SF0 PTHR10302:SF0, 1 hit
PfamiView protein in Pfam
PF00436 SSB, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS50935 SSB, 1 hit

Sequencei

Sequence statusi: Complete.

Q9KYI9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNETMICAVG NVATTPVFRD LANGPSVRFR LAVTARYWDR EKNAWTDGHT
60 70 80 90 100
NFFTVWANRQ LATNASGSLA VGDPVVVQGR LKVRTDVREG QSRTSADIDA
110 120 130 140 150
VAIGHDLARG TAAFRRTART EASTSPPRPE PNWEVPAGGT PGEPVPEQRP

DPVPVG
Length:156
Mass (Da):16,833
Last modified:October 1, 2000 - v1
Checksum:i3B5710BFD4D7C692
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939113 Genomic DNA Translation: CAB92249.1
RefSeqiNP_626917.1, NC_003888.3
WP_003976116.1, NC_003888.3

Genome annotation databases

EnsemblBacteriaiCAB92249; CAB92249; CAB92249
GeneIDi1098117
KEGGisco:SCO2683
PATRICifig|100226.15.peg.2739

Similar proteinsi

Entry informationi

Entry nameiSSB1_STRCO
AccessioniPrimary (citable) accession number: Q9KYI9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 24, 2003
Last sequence update: October 1, 2000
Last modified: May 23, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

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