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Q9KYI9

- SSB1_STRCO

UniProt

Q9KYI9 - SSB1_STRCO

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Protein

Single-stranded DNA-binding protein 1

Gene

ssb1

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. single-stranded DNA binding Source: InterPro

GO - Biological processi

  1. DNA replication Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Single-stranded DNA-binding protein 1UniRule annotation
Short name:
SSB 1UniRule annotation
Gene namesi
Name:ssb1
Ordered Locus Names:SCO2683
ORF Names:SCC61A.04c
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
ProteomesiUP000001973: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 156156Single-stranded DNA-binding protein 1PRO_0000096115Add
BLAST

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi100226.SCO2683.

Structurei

Secondary structure

1
156
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi5 – 128Combined sources
Beta strandi17 – 215Combined sources
Beta strandi24 – 3916Combined sources
Turni40 – 434Combined sources
Beta strandi44 – 5815Combined sources
Helixi59 – 6810Combined sources
Beta strandi74 – 8815Combined sources
Beta strandi91 – 10515Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4DAMX-ray1.70A/B/C/D/E/F/G/H/I/J/K/L1-116[»]
ProteinModelPortaliQ9KYI9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 107107SSBUniRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 SSB domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG0629.
HOGENOMiHOG000106485.
InParanoidiQ9KYI9.
KOiK03111.
OMAiWHPARIN.
OrthoDBiEOG6M9F32.
PhylomeDBiQ9KYI9.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_00984. SSB.
InterProiIPR012340. NA-bd_OB-fold.
IPR000424. Primosome_PriB/ssb.
IPR011344. ssDNA-bd.
[Graphical view]
PANTHERiPTHR10302. PTHR10302. 1 hit.
PfamiPF00436. SSB. 1 hit.
[Graphical view]
PIRSFiPIRSF002070. SSB. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50935. SSB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KYI9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNETMICAVG NVATTPVFRD LANGPSVRFR LAVTARYWDR EKNAWTDGHT
60 70 80 90 100
NFFTVWANRQ LATNASGSLA VGDPVVVQGR LKVRTDVREG QSRTSADIDA
110 120 130 140 150
VAIGHDLARG TAAFRRTART EASTSPPRPE PNWEVPAGGT PGEPVPEQRP

DPVPVG
Length:156
Mass (Da):16,833
Last modified:October 1, 2000 - v1
Checksum:i3B5710BFD4D7C692
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939113 Genomic DNA. Translation: CAB92249.1.
RefSeqiNP_626917.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB92249; CAB92249; CAB92249.
GeneIDi1098117.
KEGGisco:SCO2683.
PATRICi23735076. VBIStrCoe124346_2739.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939113 Genomic DNA. Translation: CAB92249.1 .
RefSeqi NP_626917.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4DAM X-ray 1.70 A/B/C/D/E/F/G/H/I/J/K/L 1-116 [» ]
ProteinModelPortali Q9KYI9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 100226.SCO2683.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB92249 ; CAB92249 ; CAB92249 .
GeneIDi 1098117.
KEGGi sco:SCO2683.
PATRICi 23735076. VBIStrCoe124346_2739.

Phylogenomic databases

eggNOGi COG0629.
HOGENOMi HOG000106485.
InParanoidi Q9KYI9.
KOi K03111.
OMAi WHPARIN.
OrthoDBi EOG6M9F32.
PhylomeDBi Q9KYI9.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
HAMAPi MF_00984. SSB.
InterProi IPR012340. NA-bd_OB-fold.
IPR000424. Primosome_PriB/ssb.
IPR011344. ssDNA-bd.
[Graphical view ]
PANTHERi PTHR10302. PTHR10302. 1 hit.
Pfami PF00436. SSB. 1 hit.
[Graphical view ]
PIRSFi PIRSF002070. SSB. 1 hit.
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50935. SSB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-471 / A3(2) / M145.

Entry informationi

Entry nameiSSB1_STRCO
AccessioniPrimary (citable) accession number: Q9KYI9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 24, 2003
Last sequence update: October 1, 2000
Last modified: November 26, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3