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Q9KYI9

- SSB1_STRCO

UniProt

Q9KYI9 - SSB1_STRCO

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Protein
Single-stranded DNA-binding protein 1
Gene
ssb1, SCO2683, SCC61A.04c
Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. single-stranded DNA binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA replication Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Single-stranded DNA-binding protein 1
Short name:
SSB 1
Gene namesi
Name:ssb1
Ordered Locus Names:SCO2683
ORF Names:SCC61A.04c
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
ProteomesiUP000001973: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 156156Single-stranded DNA-binding protein 1UniRule annotation
PRO_0000096115Add
BLAST

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi100226.SCO2683.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi5 – 128
Beta strandi17 – 215
Beta strandi24 – 3916
Turni40 – 434
Beta strandi44 – 5815
Helixi59 – 6810
Beta strandi74 – 8815
Beta strandi91 – 10515

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4DAMX-ray1.70A/B/C/D/E/F/G/H/I/J/K/L1-116[»]
ProteinModelPortaliQ9KYI9.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 107107SSB
Add
BLAST

Sequence similaritiesi

Contains 1 SSB domain.

Phylogenomic databases

eggNOGiCOG0629.
HOGENOMiHOG000106485.
KOiK03111.
OMAiWHPARIN.
OrthoDBiEOG6M9F32.
PhylomeDBiQ9KYI9.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_00984. SSB.
InterProiIPR012340. NA-bd_OB-fold.
IPR000424. Primosome_PriB/ssb.
IPR011344. ssDNA-bd.
[Graphical view]
PANTHERiPTHR10302. PTHR10302. 1 hit.
PfamiPF00436. SSB. 1 hit.
[Graphical view]
PIRSFiPIRSF002070. SSB. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50935. SSB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KYI9-1 [UniParc]FASTAAdd to Basket

« Hide

MNETMICAVG NVATTPVFRD LANGPSVRFR LAVTARYWDR EKNAWTDGHT    50
NFFTVWANRQ LATNASGSLA VGDPVVVQGR LKVRTDVREG QSRTSADIDA 100
VAIGHDLARG TAAFRRTART EASTSPPRPE PNWEVPAGGT PGEPVPEQRP 150
DPVPVG 156
Length:156
Mass (Da):16,833
Last modified:October 1, 2000 - v1
Checksum:i3B5710BFD4D7C692
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL939113 Genomic DNA. Translation: CAB92249.1.
RefSeqiNP_626917.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB92249; CAB92249; CAB92249.
GeneIDi1098117.
KEGGisco:SCO2683.
PATRICi23735076. VBIStrCoe124346_2739.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL939113 Genomic DNA. Translation: CAB92249.1 .
RefSeqi NP_626917.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4DAM X-ray 1.70 A/B/C/D/E/F/G/H/I/J/K/L 1-116 [» ]
ProteinModelPortali Q9KYI9.
ModBasei Search...

Protein-protein interaction databases

STRINGi 100226.SCO2683.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB92249 ; CAB92249 ; CAB92249 .
GeneIDi 1098117.
KEGGi sco:SCO2683.
PATRICi 23735076. VBIStrCoe124346_2739.

Phylogenomic databases

eggNOGi COG0629.
HOGENOMi HOG000106485.
KOi K03111.
OMAi WHPARIN.
OrthoDBi EOG6M9F32.
PhylomeDBi Q9KYI9.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
HAMAPi MF_00984. SSB.
InterProi IPR012340. NA-bd_OB-fold.
IPR000424. Primosome_PriB/ssb.
IPR011344. ssDNA-bd.
[Graphical view ]
PANTHERi PTHR10302. PTHR10302. 1 hit.
Pfami PF00436. SSB. 1 hit.
[Graphical view ]
PIRSFi PIRSF002070. SSB. 1 hit.
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50935. SSB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-471 / A3(2) / M145.

Entry informationi

Entry nameiSSB1_STRCO
AccessioniPrimary (citable) accession number: Q9KYI9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 24, 2003
Last sequence update: October 1, 2000
Last modified: May 14, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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