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Q9KYI9

- SSB1_STRCO

UniProt

Q9KYI9 - SSB1_STRCO

Protein

Single-stranded DNA-binding protein 1

Gene

ssb1

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 1 (01 Oct 2000)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. single-stranded DNA binding Source: InterPro

    GO - Biological processi

    1. DNA replication Source: InterPro

    Keywords - Ligandi

    DNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Single-stranded DNA-binding protein 1UniRule annotation
    Short name:
    SSB 1UniRule annotation
    Gene namesi
    Name:ssb1
    Ordered Locus Names:SCO2683
    ORF Names:SCC61A.04c
    OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
    Taxonomic identifieri100226 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
    ProteomesiUP000001973: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 156156Single-stranded DNA-binding protein 1PRO_0000096115Add
    BLAST

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi100226.SCO2683.

    Structurei

    Secondary structure

    1
    156
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi5 – 128
    Beta strandi17 – 215
    Beta strandi24 – 3916
    Turni40 – 434
    Beta strandi44 – 5815
    Helixi59 – 6810
    Beta strandi74 – 8815
    Beta strandi91 – 10515

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4DAMX-ray1.70A/B/C/D/E/F/G/H/I/J/K/L1-116[»]
    ProteinModelPortaliQ9KYI9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini1 – 107107SSBUniRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 SSB domain.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0629.
    HOGENOMiHOG000106485.
    KOiK03111.
    OMAiWHPARIN.
    OrthoDBiEOG6M9F32.
    PhylomeDBiQ9KYI9.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    HAMAPiMF_00984. SSB.
    InterProiIPR012340. NA-bd_OB-fold.
    IPR000424. Primosome_PriB/ssb.
    IPR011344. ssDNA-bd.
    [Graphical view]
    PANTHERiPTHR10302. PTHR10302. 1 hit.
    PfamiPF00436. SSB. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002070. SSB. 1 hit.
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50935. SSB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9KYI9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNETMICAVG NVATTPVFRD LANGPSVRFR LAVTARYWDR EKNAWTDGHT    50
    NFFTVWANRQ LATNASGSLA VGDPVVVQGR LKVRTDVREG QSRTSADIDA 100
    VAIGHDLARG TAAFRRTART EASTSPPRPE PNWEVPAGGT PGEPVPEQRP 150
    DPVPVG 156
    Length:156
    Mass (Da):16,833
    Last modified:October 1, 2000 - v1
    Checksum:i3B5710BFD4D7C692
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL939113 Genomic DNA. Translation: CAB92249.1.
    RefSeqiNP_626917.1. NC_003888.3.

    Genome annotation databases

    EnsemblBacteriaiCAB92249; CAB92249; CAB92249.
    GeneIDi1098117.
    KEGGisco:SCO2683.
    PATRICi23735076. VBIStrCoe124346_2739.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL939113 Genomic DNA. Translation: CAB92249.1 .
    RefSeqi NP_626917.1. NC_003888.3.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4DAM X-ray 1.70 A/B/C/D/E/F/G/H/I/J/K/L 1-116 [» ]
    ProteinModelPortali Q9KYI9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 100226.SCO2683.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAB92249 ; CAB92249 ; CAB92249 .
    GeneIDi 1098117.
    KEGGi sco:SCO2683.
    PATRICi 23735076. VBIStrCoe124346_2739.

    Phylogenomic databases

    eggNOGi COG0629.
    HOGENOMi HOG000106485.
    KOi K03111.
    OMAi WHPARIN.
    OrthoDBi EOG6M9F32.
    PhylomeDBi Q9KYI9.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    HAMAPi MF_00984. SSB.
    InterProi IPR012340. NA-bd_OB-fold.
    IPR000424. Primosome_PriB/ssb.
    IPR011344. ssDNA-bd.
    [Graphical view ]
    PANTHERi PTHR10302. PTHR10302. 1 hit.
    Pfami PF00436. SSB. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002070. SSB. 1 hit.
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50935. SSB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-471 / A3(2) / M145.

    Entry informationi

    Entry nameiSSB1_STRCO
    AccessioniPrimary (citable) accession number: Q9KYI9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 24, 2003
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3