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Protein
Submitted name:

Putative DNA ligase

Gene

SCO6907

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligaseImported
Gene namesi
Ordered Locus Names:SCO6907Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
ProteomesiUP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6907.

Structurei

3D structure databases

ProteinModelPortaliQ9KYC3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiQ9KYC3.
OMAiVLIFRTE.
OrthoDBiEOG60919Q.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KYC3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLCRLAETVR LQARSGRDVT TPWMDLAVAG MALPPGVVLD GEAVVVVDGR
60 70 80 90 100
VSFEAAQARA ASSPARSREL AARHPALLIV WDVLALPTGD VRGRPYEERR
110 120 130 140 150
VLMLDVVAGL PEGSPIQAVS ATEDVEIAQV WYETLAGSGV DGVVAKSGRS
160 170 180 190 200
PYRAGRSSSW KKVRHAETLD AEVVGFTGTA SRPRALAVRL PDGRVALSQR
210 220 230 240 250
LGAQLAAQVA AALVNNAPAA RGRAAGGESF KATEPGLLVE VLAGTTRHAV

VTVTRVR
Length:257
Mass (Da):26,966
Last modified:October 1, 2000 - v1
Checksum:i64BB5732CC06E473
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939129 Genomic DNA. Translation: CAB92569.1.
RefSeqiNP_630976.1. NC_003888.3.
WP_011031292.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB92569; CAB92569; CAB92569.
GeneIDi1102346.
KEGGisco:SCO6907.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939129 Genomic DNA. Translation: CAB92569.1.
RefSeqiNP_630976.1. NC_003888.3.
WP_011031292.1. NC_003888.3.

3D structure databases

ProteinModelPortaliQ9KYC3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6907.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB92569; CAB92569; CAB92569.
GeneIDi1102346.
KEGGisco:SCO6907.

Phylogenomic databases

InParanoidiQ9KYC3.
OMAiVLIFRTE.
OrthoDBiEOG60919Q.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-471 / A3(2) / M145Imported.

Entry informationi

Entry nameiQ9KYC3_STRCO
AccessioniPrimary (citable) accession number: Q9KYC3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: April 29, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.