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Protein
Submitted name:

Putative regulatory protein

Gene

SCO4313

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative regulatory proteinImported
Gene namesi
Ordered Locus Names:SCO4313Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ9KXS8.

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO4313.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OI8X-ray2.50A1-216[»]
ProteinModelPortaliQ9KXS8.
SMRiQ9KXS8. Positions 8-216.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9KXS8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini15 – 7561HTH tetR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH tetR-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108VFI. Bacteria.
ENOG4111JI0. LUCA.
HOGENOMiHOG000252095.
InParanoidiQ9KXS8.
OMAiFLIYGTP.
OrthoDBiPOG091H0BH4.
PhylomeDBiQ9KXS8.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KXS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPEARTSTPR ERYRTQVRAE IKDHAWEQIA TAGASALSLN AIAKRMGMSG
60 70 80 90 100
PALYRYFDGR DELITELIRD AYRSQADSLR AAAASGADLA GLAHALRAWA
110 120 130 140 150
LDDPQRYFLI FGTPVPGYRA PDDITEIAAE TMAVIVDACA ALPPSDGTDG
160 170 180 190 200
AFDAHLDTHR QWAGDRPAPS SALHRALSFW SRLHGVLSLE LAGQFTGMGF
210
DSALLFEAEL KDLLGP
Length:216
Mass (Da):23,412
Last modified:October 1, 2000 - v1
Checksum:iEC80582233978724
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939119 Genomic DNA. Translation: CAB93073.1.
RefSeqiNP_628485.1. NC_003888.3.
WP_003974661.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB93073; CAB93073; CAB93073.
GeneIDi1099753.
KEGGisco:SCO4313.
PATRICi23738434. VBIStrCoe124346_4381.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939119 Genomic DNA. Translation: CAB93073.1.
RefSeqiNP_628485.1. NC_003888.3.
WP_003974661.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OI8X-ray2.50A1-216[»]
ProteinModelPortaliQ9KXS8.
SMRiQ9KXS8. Positions 8-216.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO4313.

Proteomic databases

PRIDEiQ9KXS8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB93073; CAB93073; CAB93073.
GeneIDi1099753.
KEGGisco:SCO4313.
PATRICi23738434. VBIStrCoe124346_4381.

Phylogenomic databases

eggNOGiENOG4108VFI. Bacteria.
ENOG4111JI0. LUCA.
HOGENOMiHOG000252095.
InParanoidiQ9KXS8.
OMAiFLIYGTP.
OrthoDBiPOG091H0BH4.
PhylomeDBiQ9KXS8.

Miscellaneous databases

EvolutionaryTraceiQ9KXS8.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9KXS8_STRCO
AccessioniPrimary (citable) accession number: Q9KXS8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: September 7, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.