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Protein
Submitted name:

Uncharacterized protein

Gene

SCO1480

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:SCO1480Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
ProteomesiUP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ9KXR9.

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO1480.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4ITQX-ray2.70A1-107[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000245734.
InParanoidiQ9KXR9.
OMAiRGLGPHQ.
OrthoDBiEOG6FFSDB.

Family and domain databases

InterProiIPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR001892. Ribosomal_S13.
IPR010979. Ribosomal_S13-like_H2TH.
[Graphical view]
PfamiPF00416. Ribosomal_S13. 1 hit.
[Graphical view]
SMARTiSM00278. HhH1. 1 hit.
[Graphical view]
SUPFAMiSSF46946. SSF46946. 1 hit.
PROSITEiPS50159. RIBOSOMAL_S13_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KXR9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALPPLTPEQ RAAALEKAAA ARRERAEVKN RLKHSGASLH EVIKQGQEND
60 70 80 90 100
VIGKMKVSAL LESLPGVGKV RAKQIMERLG ISESRRVRGL GSNQIASLER

EFGSTGS
Length:107
Mass (Da):11,555
Last modified:October 1, 2000 - v1
Checksum:i3AC884F8E455FE2C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939109 Genomic DNA. Translation: CAB93360.1.
RefSeqiNP_625760.1. NC_003888.3.
WP_003977346.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB93360; CAB93360; CAB93360.
GeneIDi1096906.
12812330.
KEGGisco:SCO1480.
PATRICi23732536. VBIStrCoe124346_1489.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939109 Genomic DNA. Translation: CAB93360.1.
RefSeqiNP_625760.1. NC_003888.3.
WP_003977346.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4ITQX-ray2.70A1-107[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO1480.

Proteomic databases

PRIDEiQ9KXR9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB93360; CAB93360; CAB93360.
GeneIDi1096906.
12812330.
KEGGisco:SCO1480.
PATRICi23732536. VBIStrCoe124346_1489.

Phylogenomic databases

HOGENOMiHOG000245734.
InParanoidiQ9KXR9.
OMAiRGLGPHQ.
OrthoDBiEOG6FFSDB.

Family and domain databases

InterProiIPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR001892. Ribosomal_S13.
IPR010979. Ribosomal_S13-like_H2TH.
[Graphical view]
PfamiPF00416. Ribosomal_S13. 1 hit.
[Graphical view]
SMARTiSM00278. HhH1. 1 hit.
[Graphical view]
SUPFAMiSSF46946. SSF46946. 1 hit.
PROSITEiPS50159. RIBOSOMAL_S13_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-471 / A3(2) / M145Imported.
  2. "A novel nucleoid-associated protein specific to the actinobacteria."
    Swiercz J.P., Nanji T., Gloyd M., Guarne A., Elliot M.A.
    Nucleic Acids Res. 41:4171-4184(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.70 ANGSTROMS).

Entry informationi

Entry nameiQ9KXR9_STRCO
AccessioniPrimary (citable) accession number: Q9KXR9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 27, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.