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Q9KX27

- Q9KX27_OLICO

UniProt

Q9KX27 - Q9KX27_OLICO

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Protein
Submitted name:

Transcriptional regulator with MHYT and LytTR domains

Gene

coxC

Organism
Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

BioCyciOCAR504832:GJPZ-3595-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator with MHYT and LytTR domainsImported
Gene namesi
Name:coxCImported
Ordered Locus Names:OCA5_pHCG300280Imported
Encoded oniPlasmid pHCG3Imported
OrganismiOligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)Imported
Taxonomic identifieri504832 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeOligotropha
ProteomesiUP000007730: Plasmid pHCG3

Structurei

3D structure databases

ProteinModelPortaliQ9KX27.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains HTH LytTR-type DNA-binding domain.SAAS annotation

Phylogenomic databases

OMAiCPWSISE.

Family and domain databases

InterProiIPR007492. LytTR_DNA-bd_dom.
IPR012073. LytTR_MHYT.
IPR005330. MHYT.
[Graphical view]
PfamiPF04397. LytTR. 1 hit.
PF03707. MHYT. 3 hits.
[Graphical view]
PIRSFiPIRSF036615. MHYT_LytTR. 1 hit.
SMARTiSM00850. LytTR. 1 hit.
[Graphical view]
PROSITEiPS50930. HTH_LYTTR. 1 hit.
PS50924. MHYT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9KX27-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPITHDPMLV ALSLLVAIQA SYVGLNLSLR VSQAFALHRR LLIAGAALSF
60 70 80 90 100
AVGIWAMHFV GMLAARLPVT VDYVVLPTLL SLLVCVLVVG IAVYLATQRS
110 120 130 140 150
QRLLFVAATV MGVGIISMHY IGMMALHASA HMTHDPLYVI ASVLIAILAS
160 170 180 190 200
GWALWLAFAS ETRPSLFVCA TVLGCAIAGM HYTAMAGLTL HPIAGVPPSA
210 220 230 240 250
VPAISSGLLA LIVSVVAFLV SGFFMLALVP DQTEYPADAL ILPESSASTP
260 270 280 290 300
VSEAVALGEP ILAVAPAAES AITPGELTRT PSARIYESTL PVEKYHGSKV
310 320 330 340 350
INTADIFSVH ANAHYTYVFN GREDIFCPLS IGEIIERLPP DTFFRVHRSY
360 370 380 390 400
IINIHCVARL KRAGDNGIAE LDSPVRRSVP VSRSRLPQLR EQLAAYLGTK

GS
Length:402
Mass (Da):42,864
Last modified:October 1, 2000 - v1
Checksum:i4C6108F085CA133D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002827 Genomic DNA. Translation: AEI08103.1.
RefSeqiYP_004638430.1. NC_015689.1.

Genome annotation databases

EnsemblBacteriaiAEI08103; AEI08103; OCA5_pHCG300280.
GeneIDi10852779.
KEGGiocg:OCA5_pHCG300280.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002827 Genomic DNA. Translation: AEI08103.1 .
RefSeqi YP_004638430.1. NC_015689.1.

3D structure databases

ProteinModelPortali Q9KX27.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEI08103 ; AEI08103 ; OCA5_pHCG300280 .
GeneIDi 10852779.
KEGGi ocg:OCA5_pHCG300280.

Phylogenomic databases

OMAi CPWSISE.

Enzyme and pathway databases

BioCyci OCAR504832:GJPZ-3595-MONOMER.

Family and domain databases

InterProi IPR007492. LytTR_DNA-bd_dom.
IPR012073. LytTR_MHYT.
IPR005330. MHYT.
[Graphical view ]
Pfami PF04397. LytTR. 1 hit.
PF03707. MHYT. 3 hits.
[Graphical view ]
PIRSFi PIRSF036615. MHYT_LytTR. 1 hit.
SMARTi SM00850. LytTR. 1 hit.
[Graphical view ]
PROSITEi PS50930. HTH_LYTTR. 1 hit.
PS50924. MHYT. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete nucleotide sequence of the circular megaplasmid pHCG3 of Oligotropha carboxidovorans: function in the chemolithoautotrophic utilization of CO, H(2) and CO(2)."
    Fuhrmann S., Ferner M., Jeffke T., Henne A., Gottschalk G., Meyer O.
    Gene 322:67-75(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49405 / DSM 1227 / OM5Imported and Plasmid pHCG3Imported.
  2. "Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5."
    Volland S., Rachinger M., Strittmatter A., Daniel R., Gottschalk G., Meyer O.
    J. Bacteriol. 193:5043-5043(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Plasmid: pHCG3

Entry informationi

Entry nameiQ9KX27_OLICO
AccessioniPrimary (citable) accession number: Q9KX27
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: October 29, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3